| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0927 |
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| Symbol | |
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| ID | 3906091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1081410 |
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| End bp | 1086632 |
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| Gene Length | 5223 bp |
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| Protein Length | 1740 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878261 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_480040 |
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| Protein GI | 86739640 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.212025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGC CCGGTGCCGG GCCGGGGGGG CGGTCGGCGT CGGGATCCCG GTCCGCGTCC
GGGGGCGGCG CCCCACCCAT CGCCCTGGTC GGGATGGCGG CGCTGTTCCC CGGCGCCGGC
GACCTCGGCA CCTTCTGGGG CAACATCGTC GGGGGTGTCG ACGCGATCCG GGAGGTGTCG
CCGGAGCGTT TCGACGTTGA CGACTACTTC CGCCCCGACC TGTTTCGCCC CGACCCGCCC
CGCGGTGACC GTCCCGGCGC CGGACCGGGC GGTGTCGGCA GACCCGGCGG TGTGGGCAGC
CCCGGCGGTG CCAGCGACGC CTTCTACTGC CGGCGTGGCG GTTTCGTCGA GGAGTTCGCG
TCGTTCGATC CGGCCGCGTT CGGCATCATG CCGCTGGCCG TCGACTGGGC CGAACCCGAC
CAGCTGCTGT CCCTGCGGCT CGCCGCCGAG GCGATCACGG ACGCCGGCGG TCCCGAGCGG
TTGGGGGACG CCGAGCGTGT CGGGGTGGTG CTCGGCCGCG GCGGCTACGT CGGTCCCGGG
GTCGCCAAGC TCGAACAGCG GGTGCGCACC TCCCGCCAGA TTGTCACGAC GCTGCGCGAG
ATCCTGCCCG ACCTGCCGGC CGAGGCCGTC GAACGGGTCC GGGAGGCGTT CGTCGCCCAG
CTCGGACCGC AGCGCCCCGA GGCGTCCATC GGGCTGGTGC CGAACCTCGC CGCCTCCCGC
ATCGCCAACC GGCTCGACCT GCGCGGACCC GCCTACACCG TGGACGGGGC CTGCGCGTCA
TCGCTCATCG CCGTCGACAT GGCGATGCGT GACCTCGGGT CCGGCCGGAC CGACGCGATG
ATCGTCGGTG GCGCCCACAT CGTGCACGAG GCGTCGTTCT GGAGCGTCTT CACCCTGCTG
CGGGCGTTGT CCCCGAGTGA GATCATCCGT CCCTTCGACC GGCGGGCCGA CGGCATTCTC
ATCGGCGAGG GCGTCGGCAT GGTCGTCCTC AAGCGGCTTG CCGACGCCGA GCGCGACGGC
GATCGGATCT ACGCGGTGCT GCGGGGATCG GGCACGTCCA GTGACGGCCG GTCCGCCTCG
CTGATGGCCC CGGCCGTCGA AGGCCAGACG CTCGCCGTCC GCCGGGCCTG GGCGGATGCC
GGGCTCGACC CGACGGCGCC GGGTGCGATC GGCCTCGTCG AGGCGCACGG CACGGCCACC
CCCACCGGCG ACGCTGTGGA GCTCGCCACC CTCAGCCGGA TCTTTGGCAC CGCGTCGGGC
GGACCGGCCG GGCCGGGTCG GGCGGACATC GGGATCGGTT CCGTCAAGTC CATGATCGGT
CACGCGATGC CGGCCGCGGG CGCGGCCGCT CTGATCAAGA CCGCGCTGGC GCTGCACCAC
CGGGTCCTGC CGCCCACGCT GCACTGCGAC GAGCCGCATC CGGCGTTCGT GGGCAGCCGG
TTCGCGCCGG TGCGCGCCGT CGTCGAGTGG GACGCCCCGG CCGGCGGCGG TCCCCGCCGA
GCGGGGGTCA ACGCCTTCGG GTTCGGCGGC ATCAACGCCC ATCTGGTGCT GGAGGAGGCG
CCGGCACCCG CGGCGGTGAC GGCGGCCCGT ACGTTCGCCG CCCCGGCGGT GACCACGGTG
GACCGGGCAG CCGACCCGGA CGTCGGTCCG GACGTCGAAC CGGTGCTGCT GTTCGCCGGG
GCCGACGCGG CTGACCTGCT GGCCCAGCTC GACGTCCCGG ACGCGGAACT GCTCGCCCGC
GACGACGCCG CGACCCCGCC GACCGGTGGG CCGTGGCGGC TGGCCCTGGT CGCGCCGACC
GCCCGTCGGC TGGCGCTCGC CCGCACCGTC GTCGAGCGCG GCACCCCCTG GCGGGGACGC
AACGACCTGT GGTTCACCCC GGCAGGGATG TTCGCCCCCG CGCGGGCGGG TGGGGACTCC
CCGGCGCAGA CCGCTTTCCT GTTCTGCGGC TTGGAGGACA AGTTCACCCC GCGGATCGAC
GATGTCTGCG AACACTTCGG GCTGACGAAG CCGACCCTCG ACGACACCGG GATGCTCGGC
CGGCATGGCG TCGCGAGCGT TGAGGTCGGC CGGATCCTCG ATGTGGCGCT GCGGCGGCTC
GGGATCATCC CGGACCTCGT CGGCGGCCAC AGCATCGGCG AGTGGAACGC GATGATCTCC
TGCGGGCTGA TCACCGACGA GTACACCGAC GACTTCCTCG CCGGCTTCGA CCCGACAGCC
CTGGAGGTGC CGGGGGTCGT CTTCGGCGCG CTCGGCTGCG GCGCGCAGCG CGCGACGGAG
GTCATCGCCG GGCTCGACGA GGTCGTCGTC TCCCACGACA ACTGCCCGCA TCAGTCGATC
ATCTGTGGGC GGGAGGACAG CGTGCGTACC ACGCTGGACC GGCTGCGCCG CGACGGCGTG
CTGGGCCAGA TCCTGCCGTT CCGGTCAGGG TTCCACTCCC CGTTCCTCGA ACCGTACCTG
GACCCGATGC GGGCGCGGCT CGCCCGCACC ACGTTCGTCG AGGCGAGCGT GCCGATCTGG
TCGGCGACCA CGGTGGCGCC CTACCCGAGC GACCACGACG CCATCCGCGC GCTCGCTCTT
CGACACCTGG TCGAACCGGT ACGCTTCCGC CAGCTCGTCG AGCGGCTGCG CGAGCGCGGG
GTGCGTGCCT TCATCCAGGT CGGAGTGGGC AGCGTCGCGG GATTCGTCGA CGACACCCTG
CCCGGCAACG ACCATCTCTC GTTGGTCACG AATACCGTGA AGCGTCCCGG GCTGGACCAG
CTGCGGCGGG TCGCGGCGGC GATGTGGGCG GAAGGCGCCG CGCCCCGGAT GGACCTGCTG
CCCTGCCGGT CGCGACCCGC GCCGGCGGTG CCGCCGCTCC CCCGGGCGGC CAACGGACCG
CACCGCGTCG GCGCCCCGGT GCGGTTGAGC CTCGGCACCC CCCTGATCCG CCTCGGCGGC
GGGGCCGGCG ACCTGCTCAA CCCGGGCAGT GCCGATCGGA CCCACCGGAA CCCGCCGGCC
TGGGCCGAAG GTGACGTGCC GACGCATCCG GTGATTGCCG AGCTGCGGGC CGCGCTCGCC
GAGGCGGACG CGGTGATGTC CACCGTGGTC GACCGCTGGT CGCATGGGGC GACGCCGGCT
CGGGTCCCCC CGCCCGGATC GGGGGGCAGG GCGATCCCGG GCGATGCGAT CCCGGGCGGC
GTGCGGTCGG GCGGCGTGCG GTCGGGCGGC GTGCGCGGTG GTGCTCGGTT CCGCGCCGAC
GATGCTCCCC GGGGCGGTGG CACGTCCGGC GGTGCCGGCG GAAACGGCGA CGCGGGTTCG
ACGGGCGTCC CTCCTCGCCG CGGCGCGAGC GCGGCCGACG GCGGGGCGGC CGGTCGGGGC
ACGGGCGCCG ATCGGACGTC CGCGGTGGGC TGGGTACCCG TGCCCCGTGA CAGTCCCGAA
CCCGGGCCGC GGATGTTCCG GCGACGGCTG TCGCTGGCGT CGATGCCGCA CATCGTCGAC
CACTGCTTCT ACCGTCAGCC GCCGGGCTGG GCGGACATAT CCGATCTGTT CCCGGTCGTG
CCGATGACCG AGGTCCTCGA GCTCATGATC GGCGAGGCCG CCGCGCTGCT GCCGGGCCGG
GTGCCGGTCG GTGTCCGAGA CGTCCGGGCG TTGCGCTGGC TCGCGATCGA GCCGGCGGTG
GAGGTGTCCA TTGCGCTCGC CCCCGCGGGG CCGGACGCGG TGCGGGTGAC CGTGGACGGC
TACGCCCGCG GCACGGTGCT GTTCGCGGCG GACCACCTGC CGCCGCCCGA GTCAACCGCG
ATCACCGCCG ATCTGTCCGT GGGCCGGACG GGCCCGACGC TGCCCGTCGA GCGGCCCCCG
CGGCATCGTG GCAGGGATCT CTACGGGGCC CGGTTCCTCT TCCACGGTCC CGGCTACCAG
GGCATCCATC GGATCGAGGC GATCGCCCCG ACCGGTATCC GGGGGCGTCT GCGGGTGCCG
TCGGCGTCCG GCGCCCTGCT CGACAACGTG GGCCAGCTCT TCGGCTACTG GGCGATGGAG
CATCTGTCCG ACGACTCCCT CCTGCTCCCG CAGTCCCTGG CCGACGTGCA GTTCCACGGC
CCGGCACCGG TGGAGGGCGA CCTGGTGGAC TGCGTCGTAC GGATCCGGCA GGTGGCCGAG
CGCACGGTGA CCGCGGACAT GGAGGTGCGG CGGGCCGACG GACGTGTCTG GGCGGTCATC
ACCGGGTGGA CCGACCGCCG GTTCGCCAAC GACGACGTGC TCTGGGCGAT GGTGCGTGCA
CCGGAGTTGA ACACGGTGGC CCAGCCCTCC GGTGAGGGCT GGGTGGTCGC CGTGGACCGC
TGGCCCGACG CGGCCTCGCG GGAACTGATC GTGCGCCACT ACGCCGATGC CGCCGAGCGT
GCCCGGCTCG CCGCGCTCAA CCCCAGGGCG GCACGCGGCC GGCTGTTGGG ACGGATCGCC
GCCCAGGACG CAGTCCGGCG ATGGCTGTGG GAACGGGGAG CGGGGCCCGT CTGGGGGATC
GAGGTCGGGA TCCGTAACGA CGACGTGGGT GCCCCGGTCA TCACCTCCCT GCCGGCGCGG
CCGGGTGTCC CAGCGTTCGA CCCCCCGGGG GTGTCGCTCG CCCACAAGCC GGAGCTCGCC
GTGGCCTTGG TCGCCGCGGA CGGGGAGGTT GGCATCGATC TTGAGCGGAT CGTGTCCCGC
GCCGCCGGGG TCGAGAAGGC GGCCCTGGCG CCCACCGAAC TGCGCCTGCT CGACCGGGTC
GCCGGCACCG ATCCTCACCG GCGGGCCGTG TGGTTCACCC GGCTGTGGGC GGCGAAGGAG
GCGGCGGCGA AGGCCGACGG AACGGGCCTC GCTGGCCGTC CACGTCGGTT CGTCGTGGAC
GGCCCCCATC CCTTCCCGGG GAAGGCCCAT TCCCCGGGAA GGGATGGGCT CGCGTCCTCC
CCGGTGGGGG GCACCCCGCC CGACCTGGTC CGGGTCACCG TCTACGGGGA TGGTCCCGAC
GGGTCGGTGC CGGAGCGGAC CCGGTGGGTG GCGTTGCGTA CGGTGGACGC CGCCGGCCGG
ATTCAGCCGG AACCGACCGG CCCGGCGCCC CGCGAGGGCG GGGTATCGCC GTCGCGGCGT
CAGGACGCTG TGGGCGATGA CGTCTCCACC GGAAGAGTCG ATATCGCTAC CGTCAGTTAT
GTAGTCGCCT GGACCTCCCC CGAGGTCGAG GCGCATGGTC TCCAGAGCCA GAAGGAGTGT
TGA
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| Protein sequence | MPEPGAGPGG RSASGSRSAS GGGAPPIALV GMAALFPGAG DLGTFWGNIV GGVDAIREVS
PERFDVDDYF RPDLFRPDPP RGDRPGAGPG GVGRPGGVGS PGGASDAFYC RRGGFVEEFA
SFDPAAFGIM PLAVDWAEPD QLLSLRLAAE AITDAGGPER LGDAERVGVV LGRGGYVGPG
VAKLEQRVRT SRQIVTTLRE ILPDLPAEAV ERVREAFVAQ LGPQRPEASI GLVPNLAASR
IANRLDLRGP AYTVDGACAS SLIAVDMAMR DLGSGRTDAM IVGGAHIVHE ASFWSVFTLL
RALSPSEIIR PFDRRADGIL IGEGVGMVVL KRLADAERDG DRIYAVLRGS GTSSDGRSAS
LMAPAVEGQT LAVRRAWADA GLDPTAPGAI GLVEAHGTAT PTGDAVELAT LSRIFGTASG
GPAGPGRADI GIGSVKSMIG HAMPAAGAAA LIKTALALHH RVLPPTLHCD EPHPAFVGSR
FAPVRAVVEW DAPAGGGPRR AGVNAFGFGG INAHLVLEEA PAPAAVTAAR TFAAPAVTTV
DRAADPDVGP DVEPVLLFAG ADAADLLAQL DVPDAELLAR DDAATPPTGG PWRLALVAPT
ARRLALARTV VERGTPWRGR NDLWFTPAGM FAPARAGGDS PAQTAFLFCG LEDKFTPRID
DVCEHFGLTK PTLDDTGMLG RHGVASVEVG RILDVALRRL GIIPDLVGGH SIGEWNAMIS
CGLITDEYTD DFLAGFDPTA LEVPGVVFGA LGCGAQRATE VIAGLDEVVV SHDNCPHQSI
ICGREDSVRT TLDRLRRDGV LGQILPFRSG FHSPFLEPYL DPMRARLART TFVEASVPIW
SATTVAPYPS DHDAIRALAL RHLVEPVRFR QLVERLRERG VRAFIQVGVG SVAGFVDDTL
PGNDHLSLVT NTVKRPGLDQ LRRVAAAMWA EGAAPRMDLL PCRSRPAPAV PPLPRAANGP
HRVGAPVRLS LGTPLIRLGG GAGDLLNPGS ADRTHRNPPA WAEGDVPTHP VIAELRAALA
EADAVMSTVV DRWSHGATPA RVPPPGSGGR AIPGDAIPGG VRSGGVRSGG VRGGARFRAD
DAPRGGGTSG GAGGNGDAGS TGVPPRRGAS AADGGAAGRG TGADRTSAVG WVPVPRDSPE
PGPRMFRRRL SLASMPHIVD HCFYRQPPGW ADISDLFPVV PMTEVLELMI GEAAALLPGR
VPVGVRDVRA LRWLAIEPAV EVSIALAPAG PDAVRVTVDG YARGTVLFAA DHLPPPESTA
ITADLSVGRT GPTLPVERPP RHRGRDLYGA RFLFHGPGYQ GIHRIEAIAP TGIRGRLRVP
SASGALLDNV GQLFGYWAME HLSDDSLLLP QSLADVQFHG PAPVEGDLVD CVVRIRQVAE
RTVTADMEVR RADGRVWAVI TGWTDRRFAN DDVLWAMVRA PELNTVAQPS GEGWVVAVDR
WPDAASRELI VRHYADAAER ARLAALNPRA ARGRLLGRIA AQDAVRRWLW ERGAGPVWGI
EVGIRNDDVG APVITSLPAR PGVPAFDPPG VSLAHKPELA VALVAADGEV GIDLERIVSR
AAGVEKAALA PTELRLLDRV AGTDPHRRAV WFTRLWAAKE AAAKADGTGL AGRPRRFVVD
GPHPFPGKAH SPGRDGLASS PVGGTPPDLV RVTVYGDGPD GSVPERTRWV ALRTVDAAGR
IQPEPTGPAP REGGVSPSRR QDAVGDDVST GRVDIATVSY VVAWTSPEVE AHGLQSQKEC
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