Gene Francci3_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0882 
Symbol 
ID3905139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1027311 
End bp1027859 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content57% 
IMG OID637878215 
Producthypothetical protein 
Protein accessionYP_479995 
Protein GI86739595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.956838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGC CGATCCGTCG TACGTCGAGC GAGATCCGAG CGATCGAACT TCTAAAAGAC 
TGCGGATACG CAAATTATAT TCCAGTCCCG GTAGACCGCA TAGCCGCCTC CCTCCGCGCG
GTGGTTCGCT ACCAGCCCTT TGAGGCAGAC GACATTTCCG GCCTACTACT ACGCCAAGAT
GGCCAGCCAG CTATTATTGG CGTCAACAGC GTCAATGCCC CGGTTCGTCA ACGTTTCACA
ATCGCGCACG AGATTGGTCA CCTTCTGTTG CATGAGGGTA AGGGGCTCAT TCTTGACCGG
CTCGTGCGCG TAAACTTTCG GGACGCAGTC TCGTCTACAG CGACAGATCG GCAAGAGCGT
GAGGCGAATG CCTTTGCGGC AGCGCTACTC ATGCCCGACG AACGGATAGT CGAACAACTC
GACCAGCTCA CCAGCGGTCG ACTAAGGTCG GACACGGCTA TCGTGCAGCA TCTTGCAAGA
ACCTTTGACG TGTCGCGGCA GGCAATGGAG TTCCGCCTCA TCAATCTCGG TTTGCTCTCG
CCCGCTTAA
 
Protein sequence
MNPPIRRTSS EIRAIELLKD CGYANYIPVP VDRIAASLRA VVRYQPFEAD DISGLLLRQD 
GQPAIIGVNS VNAPVRQRFT IAHEIGHLLL HEGKGLILDR LVRVNFRDAV SSTATDRQER
EANAFAAALL MPDERIVEQL DQLTSGRLRS DTAIVQHLAR TFDVSRQAME FRLINLGLLS
PA