| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0842 |
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| Symbol | |
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| ID | 3905119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 984130 |
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| End bp | 984540 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878175 |
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| Product | transthyretin |
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| Protein accession | YP_479955 |
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| Protein GI | 86739555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTGCGAT GGTCAGCCCG GATGGTGGGA TGGTCGAGGC CCGACCCGGG CCGCGGCGAC
GGAGGACGCG ACCGAGGAGG CGTGGTGAGT CTGTCCACCC ATGTCCTGGA CACGGCCACG
GGGCGGCCAG CCGCCGGGCT GCCGCTCCGG TTGGAACGGG CGGTGCGTAC CCTTGACGGC
ACGACCACGG GCTGGATCGC GGTCACCGAG GCCGTCACCG ACGACGACGG CCGGGTGGCG
GATCTGCCGG CGACCATCCC AGGCCCCTGG CGGCTCGTCT TCGACACCGC GAGCCGCTCG
GCGTTCTTTC CCGAGGTGAC CATCGCGTTC GTGATCGAGG ACCCGGCGGG TCATCATCAC
GTCCCGCTGC TGCTCGCTCC GTTCGGTTAT TCGACCTATC GGGGGAGCTG A
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| Protein sequence | MVRWSARMVG WSRPDPGRGD GGRDRGGVVS LSTHVLDTAT GRPAAGLPLR LERAVRTLDG
TTTGWIAVTE AVTDDDGRVA DLPATIPGPW RLVFDTASRS AFFPEVTIAF VIEDPAGHHH
VPLLLAPFGY STYRGS
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