| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0820 |
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| Symbol | |
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| ID | 3906447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 956036 |
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| End bp | 956950 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878153 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_479933 |
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| Protein GI | 86739533 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCG CGGCGCAGTT CCCCGCGGGC CGGCCGACCG TGGCGGAGGC GTATGCCGCC
TGCGAGGCCG TGACCAAGGA GGCGGCACGC AACTTCTCCT ACGGCATTCG CCTGCTGCCG
GCCGAGAAGC GGGGGGCGCT GAGCGCCGTC TACGCGCTCG CCCGCCGCCT CGACGACATC
GGCGACGGCG ATCTTCCCGA GGAGGCGAAG TTCGCCGGGC TGGCGCAGGT CCGCGCGGAG
GTCGAGGAGC TGGGGACGAA CAGCTCCGAT GATCCGGTCT TCGTCGCCCT CGCCGACGCC
GCCCGCCGGT TCCCGATCCC GTTGGAGGCG TTCATCGAAC TCGCCGACGG GGTCGAGAGT
GACGTGCGCG GCACCACCTA CGACACGTTC GACGATCTCG TCGGCTACTG CCGCCTGGTC
GCCGGGACGA TCGGGCGTCT CTCGCTCGGC ATCTTTGGCA GCGAGCGGGC CACCTCCCAC
CGCGACGCCT CGGGGGTCGC GGACGCCCTC GGGGTCGCAC TCCAGCAGAC GAACATCCTC
CGGGACGTGC GCGAGGACCT GCTCGGCGGC CGGATCTACC TGCCGCGCCA GGAGCTGAAG
GCCGCCGGCG TCGAACTCGA GGTGGACGCG ACCGGTCGCC TCGGCGGCCC CCCCGACGCG
CTCATCGCGT ACCTGCGGAC GTCGGCGCAG CGAGCGGAGG AGTGGTATGG GCGTGGGCTC
GTCCTGCTCG ACCTGCTCGA CCGGCGCAGC GCGGCCTGTT GTGGGGCGAT GGCCGGCATC
TACCTGCGGC TCAACCGGCG GATCAAGACC GATCCGTCCG CGGTGCTCGA TCGTCGGCTG
GCGCTGCCCG GCTGGGAGAA GGCGGTCGTC GCCGCCCGCA GCCTCGCGGG GCGGCCCGAG
ATGAGGGCGG CATGA
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| Protein sequence | MSTAAQFPAG RPTVAEAYAA CEAVTKEAAR NFSYGIRLLP AEKRGALSAV YALARRLDDI
GDGDLPEEAK FAGLAQVRAE VEELGTNSSD DPVFVALADA ARRFPIPLEA FIELADGVES
DVRGTTYDTF DDLVGYCRLV AGTIGRLSLG IFGSERATSH RDASGVADAL GVALQQTNIL
RDVREDLLGG RIYLPRQELK AAGVELEVDA TGRLGGPPDA LIAYLRTSAQ RAEEWYGRGL
VLLDLLDRRS AACCGAMAGI YLRLNRRIKT DPSAVLDRRL ALPGWEKAVV AARSLAGRPE
MRAA
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