| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0792 |
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| Symbol | |
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| ID | 3905728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 922491 |
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| End bp | 923327 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878125 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_479905 |
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| Protein GI | 86739505 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.623292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCC TGGCGCCTGC GGCGTCCGGC GCCGCAGGCG GCGTGTTCGA GGGTGCGCCC
ACGATGCCCC TGCCCGTCCT TATGTACCAC GGCGTCGGTG ATTCGGTGAG TGCGGACTTC
CGACGCTGGG AGGTCCCTCC CGGTGCCTTC GCCGAGCAGC TCGAGGCCCT CGTCGAAAGC
GGCTACCACC TCACCGGTCT CACTGACGCG CTGGCACATC CCACCCGCCG CCAGGTGGTG
ATTACCTTTG AGAACGGCTT CGAGGACTTC GTCACCACCG CGGTGCCCGC TCTGCGGGCG
ATCGGGGCCA GCGCTACCCT GTATGTGCCG ACCGCCTTCG TCGGCCGGCG CGCCACCTGG
CTGGATGGCT ACACCGAGCG CAACCTCCCC CTGTTGGACT GGTCCGACCT CGCCGCGCTC
GCCGGGGAGG GCATCGAGCT TGGCTCGCAC GGTCACCGTC ATCTGGAGCT CGACGTGGTG
CCGACCGCTC TGGCGCGGTA CGACGTCACC GCCAGCCGGC GGCTGATCGA GGAGAGAACC
GGCCGGCGTC CGGACAGCTT CTGCTACCCC TTCGGTTATC ACTGTGCGGC GGTGCGCCAT
GTCGTCGCGG CCGCCGGGTT CGAATCAGCC TGTGAGGTCG GATACCGCAT TCATCAACCG
ACGTTGTCCC GGTTCGCCAT CAGCCGATTG ATCGTCAATC GGGCCGCTGG GGCGGCCGAC
ATCCTTCGGC TCGTTTCCCA GGGGCATCGC GACGCCCTGC TCAGCGTCCG GCGAGGACTG
CAGTCGGGGT GGCGGACATA TCGAGCGGCG CGCTGGCGGC TCGGCCGAGG CGCCTGA
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| Protein sequence | MTSLAPAASG AAGGVFEGAP TMPLPVLMYH GVGDSVSADF RRWEVPPGAF AEQLEALVES
GYHLTGLTDA LAHPTRRQVV ITFENGFEDF VTTAVPALRA IGASATLYVP TAFVGRRATW
LDGYTERNLP LLDWSDLAAL AGEGIELGSH GHRHLELDVV PTALARYDVT ASRRLIEERT
GRRPDSFCYP FGYHCAAVRH VVAAAGFESA CEVGYRIHQP TLSRFAISRL IVNRAAGAAD
ILRLVSQGHR DALLSVRRGL QSGWRTYRAA RWRLGRGA
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