Gene Francci3_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0788 
Symbol 
ID3905724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp918222 
End bp918935 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID637878121 
Producthypothetical protein 
Protein accessionYP_479901 
Protein GI86739501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.716296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGA CCAAACATGT GCCTGTGACC AGCGGCGGGA CGGGGTCGGC CGGAGCAACG 
GGGTCGGCCG GAGCAACGGG GTCGGCCGGA GCAACGGGGT CGGCCGGAGC AACGGGGTCG
GCCGGAGTAA CGGGGTCGGC CGGAGTAACG GGGTCGACCG GAGTAACGGG GTCGACCGGA
ACACCGGACG GAGTCGTCCG CCCGGACGGA GTCGTCCGCC CGGACGGAGT CGTCCGCCCG
GACGGAGTCG TCCGCCCGGA CGGAGTCGTC CGCCCGGACG GGACCAACCG CGCGGACGGC
GGGACCATTC TCGTGCTGAC GTTGGGGTAT CTCATGGTCG CGGCGATGCT GGTGGTCGTT
GTGACCGACG TGTCCGCCGT CTACCTCGCT CGTCGGTCGG TGGCCTCGGC CGCCGACGGC
GCCGCGCTGG CCGCTGCCCA GCGCATCGAC GAGAACGCGA TCTACACCAC CACCGACGCC
TTCGAGCGCC TGCCCCTCGC CGACATCGCC ACGACCGTCG ATCAGTACCA GCGCCGGGCC
GATCCGAGTG GCCGCACGAT CCTCACCTCC ACCCTCGTCG ACGCGACGAC GGTGGAGGTG
GAGGGCACGC GTGTGGTCGA CCTTCCGGTC GTCGGCTCCC TCGGGGTGGG TCCGGTCACG
GTACGTGCCG GAGCGCAGGC ACAGTCGGTG GTCCGCCAGC CCGCTGCACC ATGA
 
Protein sequence
MPVTKHVPVT SGGTGSAGAT GSAGATGSAG ATGSAGATGS AGVTGSAGVT GSTGVTGSTG 
TPDGVVRPDG VVRPDGVVRP DGVVRPDGVV RPDGTNRADG GTILVLTLGY LMVAAMLVVV
VTDVSAVYLA RRSVASAADG AALAAAQRID ENAIYTTTDA FERLPLADIA TTVDQYQRRA
DPSGRTILTS TLVDATTVEV EGTRVVDLPV VGSLGVGPVT VRAGAQAQSV VRQPAAP