| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0781 |
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| Symbol | |
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| ID | 3905810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 909583 |
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| End bp | 910533 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878114 |
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| Product | type II secretion system protein |
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| Protein accession | YP_479894 |
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| Protein GI | 86739494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGG TCGCCAGCGG TGCGCTGATC GGGTTCCTCG TCGGGCTGGG CCTGGTCATC
ATCGTTTACC GCTCCCCCCG GGCCCGGCGC ATCCACCTCG CTGACCGAAT CGATCCCTAC
CTGCGGGACA CCCCCACACC CTCGAGGCTG CTCGACGACC GGCCGCGGGG GGTGCCGCGG
CCGGGCCTCG CCGCGGTCGA GGCGCTCGCG CGCCCGTTAC TCGCGGACGC CGCCGGTCGA
CTCGACCGTT TCCTGGGGGG CCGGGCCGCC CTGCAACGCC GGCTGACCCA GGCCGGCGGA
CGGACCAGCA TCGAGGAGTT CCGCGTCCAG CAGGTCATCT GCGCGGCCAG CGGGGCGCTG
ATCGGCGCCT TCCTGCTGGC GCTGCGCGCG CTGCTCGGCG TCGGCCCGCC GGCCCTGGTC
AGTGTCGCCT TGATCGTCGC TGGCACGGCC GGTGGGGTGG TGGCCCGGGA CTACTGGCTG
TCGCGGGCGA TCTCCGAACG CGAGGACCGG ATGCTGCTGG AGTTCCCGAC GATCGCGGAG
CTGCTGGCGC TCGCGGTGAC CGCGGGGGAG TCGGCCATCG GGGCGCTGGA GCGGGTCAGC
CGGTTGACCC ACGGCGAGCT TGGGCGCGAG CTGCGGCTTG CGCTGGCCGA CGCCCGCGCC
GGGGCCACCC TCGTGCAGGC GTTGGAGGGC ATCGCGGCGC GTACGGCGTT GGCGCCCCTA
GTGCGGTTCG TCGACGGGAT GGCGGTCGCG ATCGAACGGG GGACGCCGCT GGCGGACATC
CTGCGCGCGC AGGCCGTCGA CGCGCGTGAG GCGGGCAAGC GGCAGCTGCT GGAGGCCGGT
GGCCGCAAGG AGATCGCGAT GATGATCCCG GTCGTGTTCC TCGTCCTGCC GACGACCGTG
ATTTTTGCCT TCTACCCGGC CCTGGTGAGT TTCACCGTGA TCGCGCAGTG A
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| Protein sequence | MTTVASGALI GFLVGLGLVI IVYRSPRARR IHLADRIDPY LRDTPTPSRL LDDRPRGVPR
PGLAAVEALA RPLLADAAGR LDRFLGGRAA LQRRLTQAGG RTSIEEFRVQ QVICAASGAL
IGAFLLALRA LLGVGPPALV SVALIVAGTA GGVVARDYWL SRAISEREDR MLLEFPTIAE
LLALAVTAGE SAIGALERVS RLTHGELGRE LRLALADARA GATLVQALEG IAARTALAPL
VRFVDGMAVA IERGTPLADI LRAQAVDARE AGKRQLLEAG GRKEIAMMIP VVFLVLPTTV
IFAFYPALVS FTVIAQ
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