| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0780 |
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| Symbol | |
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| ID | 3905809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 908696 |
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| End bp | 909586 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878113 |
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| Product | type II secretion system protein |
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| Protein accession | YP_479893 |
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| Protein GI | 86739493 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCT TCCTCGGCCT GCTGTTCGGT CTGGGTCTGT TCCTTATCGT CACCAGCGGC
CGGCCGCGGT TCCCGGCCTG GTCGGCGACG GCGCGCTGGG AACGGTCGAC GAGCGACCTG
CTCGCCCAGG CGGGCATCCG CGGCGTGACC CCGCGCCAGT TCGTCATGAT TAGCCTGGGT
CTGGGCCTGT TGGTCGGCCT GGTCGTCCTG GCATTCACCG AGACCGTGTC GCTGGCCGGC
GCCTTCGTCG TGTTTGCGAG TCTGCTGCCC CGAGCTCTCG TGGTCCGTCG GCGGCATGCC
CGCAGGCATG ATCTGCGGGA GCTGTGGCCG GACGTCGTCG ACAACCTGTC CAGCGCGGTG
CGGGCCGGGA TGTCGCTGCC CGAGGGCCTG GCCGCGGTGG GGGTGCGGGG GCCGGTGCAG
CTGCGACCGG CCTTCACCCG GTTCGGCGAG GACTACAGCG CCACCGGGTC GTTCTCGGCC
TGCCTGGACC GCCTCGCCGA CGAGCTCGCC GATCCGGTGG CCGACCGCAT CATCGAGTCG
CTGCGGATGG CCCGGGAGGT CGGCGGGACC GACCTCGGCC GGCTGTTGCG CACGCTGTCC
ACCTTCCTGC GGGAGGACGC CCGCACCCGC GCCGAGCTTG AGACGCGGCA GAGTTGGACG
GTGAACGCCG CCCGACTCGC GCTCGCCGCC CCCTGGATCG TGCTGCTCCT GCTGGCCACC
CGGGGGCAGA ACGTGCGGGC CTACGACAGC CCGACCGGGG TCCTGGTGCT CGTGGTGGGC
GGCGCCGTGT CGGCCCTCGC CTACCTGCTC ATGAAGCGGA TCGGCCGGTT GCCGGAGGAG
GGCCGGGTGC TGCGCGGGGG AGCGGCAGCC GGCCGGGGGG CGGGATTGTG A
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| Protein sequence | MGIFLGLLFG LGLFLIVTSG RPRFPAWSAT ARWERSTSDL LAQAGIRGVT PRQFVMISLG
LGLLVGLVVL AFTETVSLAG AFVVFASLLP RALVVRRRHA RRHDLRELWP DVVDNLSSAV
RAGMSLPEGL AAVGVRGPVQ LRPAFTRFGE DYSATGSFSA CLDRLADELA DPVADRIIES
LRMAREVGGT DLGRLLRTLS TFLREDARTR AELETRQSWT VNAARLALAA PWIVLLLLAT
RGQNVRAYDS PTGVLVLVVG GAVSALAYLL MKRIGRLPEE GRVLRGGAAA GRGAGL
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