Gene Francci3_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0772 
Symbol 
ID3905801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp898234 
End bp899007 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content73% 
IMG OID637878105 
Producthypothetical protein 
Protein accessionYP_479885 
Protein GI86739485 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC TCGCCGCGGC ACCGGCCCGC CCGGAGGCGT CCCCGCCACC GACATCACCC 
CCGGCCCGTC GGTTGACCCG CCGACGGTGG CGCGACTCCC GGCTGCTCGT CGGGGTGTTG
CTCGTGCTCG TCTCGGTGGT CGTCGGGGCG CGGCTGTTCG CCAGCGCGGA CGCGACCCGC
CAGTGGGTGG TCGCCAAGGT GGACCTGCCG GCCGGGCACA TCATCGTTGC CGGGGATCTC
GCCACGGTAT CGGCCAGGCT CGACGAGAGG ACCTCGGGTC ATTACTACCC GGGAAGCCGT
CTCGACGACC TGATCGGCGC CACCCTGGCG CGGCCGGTGG ACACCGGCGA GCTGGTGAGC
GGACCCGACT TCGCCGGCCA GAACACCCAG CCGACGCGGC TGGTGCCGAT CATTGTGAAG
GCCGGGCGGC TGCCGACCCT CGGACCGGGT GACCATGTGG ACGTCTTCGT GTTCCAGAGC
GGCGCCGCAG CGCCGAGCAC TACCGGGGGC GATCAGCAGG CCGGCCGGAG CACACCGGCC
GCGCCCGCGG GTGCGGGGGC CGAGGCGCTG GTCCTGCACG ACGTCGAGTT CGTCAGCCTC
GAGAAGCTGA CCAGCGGGGA CCGTTCGCTG ACGCTGCGCG TGCCGGTGGA CAACGCCATC
CAGGCCGTCG CGGCCTCGCA GAGCGAGCGG GTCGACGTCG TGAAGCTTGA GCGCGACTCC
CGCGGTGAGG TCGGCTCGAC GGGACCGACC ACTGTGCCGG GGTACGGCCG GTGA
 
Protein sequence
MTELAAAPAR PEASPPPTSP PARRLTRRRW RDSRLLVGVL LVLVSVVVGA RLFASADATR 
QWVVAKVDLP AGHIIVAGDL ATVSARLDER TSGHYYPGSR LDDLIGATLA RPVDTGELVS
GPDFAGQNTQ PTRLVPIIVK AGRLPTLGPG DHVDVFVFQS GAAAPSTTGG DQQAGRSTPA
APAGAGAEAL VLHDVEFVSL EKLTSGDRSL TLRVPVDNAI QAVAASQSER VDVVKLERDS
RGEVGSTGPT TVPGYGR