Gene Francci3_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0758 
Symbol 
ID3905826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp882138 
End bp883433 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID637878091 
Producthypothetical protein 
Protein accessionYP_479871 
Protein GI86739471 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.877651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCA CCGGCCGTAC CGTCGCACTG GCCCTGTTCG GGGCGCTGGT CGTCGTCCTG 
TCCCCCGCCC CGGGCCTGAC CCTCGTGCTG GTCGACCTGG TGGTGGTGGG CTTGGTCGCC
CTCGACCTCG CCCTGGCGGG TGGGGTCCGC ACGCTGGAGT TCAGCCGCTC CGGACCGACC
GCCGGGCGGC TGGGTCAGCC CGTTCCGCTG GTGCTCGGCG TCACGAACGG CGGCACCCGC
ACGGTGCGTG CCCACATCCG CGACGCCTGG CCGCCGTCCT CGGGGTCCCG GCCGCGGGAG
CACCGGGTCA CCGTTCCGGC GGGGGAGCGG CGCTTCCTGG AGACGACGCT GCATCCGACC
CGGCGCGGCG ACCGGGAGCC GTTCCGCATC ACGATCCGTT CGCTGGGGCC ACTCGGCCTC
GCCGGCCGGC AGGGACGGCA TCACTGCGCA TGGCGGGTCC GAGTGCTGCC GCCGTTCACG
TCACGCCGCC ATCTGCCGGC CGCTCTCGCG CGGCTGCGGG AGGTCGAGGG CGAGGTCGCC
ATCCGCGGCG CGGGCGCCGG CTGCGAGTTC GACAGCCTGC GGGACTATGT GATCGGCGAC
GACGTTCGGC TGATCGACTG GCGGGGTACC GCCCGGCGCG GGACCGTCGT CGTCCGTACC
TTCCGACCGG AGCGTGACCG CAGGGTCGTC TGCGTACTCG ACACGGGTCG GACCTCGGCC
GGGCGAATCG GCGATACCCC CCGACTGGAC CACGCGCTCG ACGCCGCGCT GCTGCTCACC
GCGGTGGCGC TACGCGCGGG TGACCAGGTG GGTCTCGTGG CGCACGACAG CGTTCCTCGG
ATCACCCTGC CAGGCGGGCA CGATCACGGG TTGCTCGCCC GGATGAGCGA CGCGATGGCC
ATCCTGGAAC CGGCCCTGAT CGAGGCCGAT CATGGCGGAA TCGTGTCGAC GGTGCTGCGC
GGGACTTCGC GGCGGTCCCT GGTCGTCCTG TTCACCGACC TGGTACCAGC GGTGATCGAG
GAGGGGCTGC TCCCGGCTCT GCCGACGCTG GCCGCGCGGC ACACTGTCGT GGTCGCGGCG
CTGCGCGACC CGCGCGTGGA CGAGATGACG ACCGGCCGAG GTGACGTCCG TGAGGTGTAC
GCGGCCGCGG CGGCCGAACA GACTCTGCTG CGGCGACGGG AGCTCACCGA GACGCTGCGC
CGCCGCGGGG TCGAGGTGGT GGACGCACCG CCGAGCGGCT ACGCGGCGGC CGTCACCGAC
ATCTACCTCA CCTTGAAATC CCTCGGCCGG CTCTAG
 
Protein sequence
MAITGRTVAL ALFGALVVVL SPAPGLTLVL VDLVVVGLVA LDLALAGGVR TLEFSRSGPT 
AGRLGQPVPL VLGVTNGGTR TVRAHIRDAW PPSSGSRPRE HRVTVPAGER RFLETTLHPT
RRGDREPFRI TIRSLGPLGL AGRQGRHHCA WRVRVLPPFT SRRHLPAALA RLREVEGEVA
IRGAGAGCEF DSLRDYVIGD DVRLIDWRGT ARRGTVVVRT FRPERDRRVV CVLDTGRTSA
GRIGDTPRLD HALDAALLLT AVALRAGDQV GLVAHDSVPR ITLPGGHDHG LLARMSDAMA
ILEPALIEAD HGGIVSTVLR GTSRRSLVVL FTDLVPAVIE EGLLPALPTL AARHTVVVAA
LRDPRVDEMT TGRGDVREVY AAAAAEQTLL RRRELTETLR RRGVEVVDAP PSGYAAAVTD
IYLTLKSLGR L