Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0758 |
Symbol | |
ID | 3905826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 882138 |
End bp | 883433 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878091 |
Product | hypothetical protein |
Protein accession | YP_479871 |
Protein GI | 86739471 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.877651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGATCA CCGGCCGTAC CGTCGCACTG GCCCTGTTCG GGGCGCTGGT CGTCGTCCTG TCCCCCGCCC CGGGCCTGAC CCTCGTGCTG GTCGACCTGG TGGTGGTGGG CTTGGTCGCC CTCGACCTCG CCCTGGCGGG TGGGGTCCGC ACGCTGGAGT TCAGCCGCTC CGGACCGACC GCCGGGCGGC TGGGTCAGCC CGTTCCGCTG GTGCTCGGCG TCACGAACGG CGGCACCCGC ACGGTGCGTG CCCACATCCG CGACGCCTGG CCGCCGTCCT CGGGGTCCCG GCCGCGGGAG CACCGGGTCA CCGTTCCGGC GGGGGAGCGG CGCTTCCTGG AGACGACGCT GCATCCGACC CGGCGCGGCG ACCGGGAGCC GTTCCGCATC ACGATCCGTT CGCTGGGGCC ACTCGGCCTC GCCGGCCGGC AGGGACGGCA TCACTGCGCA TGGCGGGTCC GAGTGCTGCC GCCGTTCACG TCACGCCGCC ATCTGCCGGC CGCTCTCGCG CGGCTGCGGG AGGTCGAGGG CGAGGTCGCC ATCCGCGGCG CGGGCGCCGG CTGCGAGTTC GACAGCCTGC GGGACTATGT GATCGGCGAC GACGTTCGGC TGATCGACTG GCGGGGTACC GCCCGGCGCG GGACCGTCGT CGTCCGTACC TTCCGACCGG AGCGTGACCG CAGGGTCGTC TGCGTACTCG ACACGGGTCG GACCTCGGCC GGGCGAATCG GCGATACCCC CCGACTGGAC CACGCGCTCG ACGCCGCGCT GCTGCTCACC GCGGTGGCGC TACGCGCGGG TGACCAGGTG GGTCTCGTGG CGCACGACAG CGTTCCTCGG ATCACCCTGC CAGGCGGGCA CGATCACGGG TTGCTCGCCC GGATGAGCGA CGCGATGGCC ATCCTGGAAC CGGCCCTGAT CGAGGCCGAT CATGGCGGAA TCGTGTCGAC GGTGCTGCGC GGGACTTCGC GGCGGTCCCT GGTCGTCCTG TTCACCGACC TGGTACCAGC GGTGATCGAG GAGGGGCTGC TCCCGGCTCT GCCGACGCTG GCCGCGCGGC ACACTGTCGT GGTCGCGGCG CTGCGCGACC CGCGCGTGGA CGAGATGACG ACCGGCCGAG GTGACGTCCG TGAGGTGTAC GCGGCCGCGG CGGCCGAACA GACTCTGCTG CGGCGACGGG AGCTCACCGA GACGCTGCGC CGCCGCGGGG TCGAGGTGGT GGACGCACCG CCGAGCGGCT ACGCGGCGGC CGTCACCGAC ATCTACCTCA CCTTGAAATC CCTCGGCCGG CTCTAG
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Protein sequence | MAITGRTVAL ALFGALVVVL SPAPGLTLVL VDLVVVGLVA LDLALAGGVR TLEFSRSGPT AGRLGQPVPL VLGVTNGGTR TVRAHIRDAW PPSSGSRPRE HRVTVPAGER RFLETTLHPT RRGDREPFRI TIRSLGPLGL AGRQGRHHCA WRVRVLPPFT SRRHLPAALA RLREVEGEVA IRGAGAGCEF DSLRDYVIGD DVRLIDWRGT ARRGTVVVRT FRPERDRRVV CVLDTGRTSA GRIGDTPRLD HALDAALLLT AVALRAGDQV GLVAHDSVPR ITLPGGHDHG LLARMSDAMA ILEPALIEAD HGGIVSTVLR GTSRRSLVVL FTDLVPAVIE EGLLPALPTL AARHTVVVAA LRDPRVDEMT TGRGDVREVY AAAAAEQTLL RRRELTETLR RRGVEVVDAP PSGYAAAVTD IYLTLKSLGR L
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