| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0677 |
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| Symbol | |
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| ID | 3905265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 772411 |
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| End bp | 774675 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878010 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_479790 |
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| Protein GI | 86739390 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00766403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0478204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGG CGGGCCTGGC GGACCCGGCG GAACCGGGGC CCGGTGGGCT GCGGGAGCGC
GCGGAGGAGC TGCTGCGGGC GCTTGCCGGG CCGGCCGCGG CGCTGCGCGA GGACCAGTGG
CAGGCCATCG ACGCGCTCGT GACCCACCGG CGCCGGGTGC TGCTCGTCCA GCGCACCGGT
TGGGGCAAGT CGGCGGTGTA CTTCCTCGCC ACGGCACTGC TCCGCGGCGC AGCGGGACGC
GCTGCTCCGA CGGTGATCGT CTCCCCGTTG CTCGCGCTCA TCCGCAACCA GGCGGCGGCC
GCGGCGAGGC TGGGCATCCG CGCCGGCGAG ATTCACTCCG GCAACGTGAC CGAGTGGGAC
GAGGTCTACG CGGCGTTGCG GTCGGGCGAG CTCGACGTGC TGCTCGTCGG GCCGGAGCGG
CTGAACAATC CGACCTTCCG GGACGACTAC CTGCCCGAGC TCGCCGCCAC CACCGGGTTG
CTCGTCATCG ACGAGGCGCA CTGCATCTCC GACTGGGGGC ACGACTTCCG GCCCGACTAC
CGGCGGCTGC GCACTCTCGT CGCCGGGCTG CGTCCGCGGG TCCCGGTGCT GGCCACGACG
GCCACCGCCA ACACCCGCGT GGTCGAGGAC GTCAGTGAGC AGCTCGGAAC CTCCGCTCCC
GCCGGCCCGG CGTCCGCCGG GACGTTGGTG CTACGCGGGA GTCTCGATCG GGAGAGCCTG
CGGCTCGCGG TCGTGTCGCT GCCGCAGGCC GAGCACCGGT TCGGCTGGCT CGCCGACCAT
CTCGGCGAGC TGCCCGGATC GGGGATCGTC TACACGCTGA CGAAGGCGGC GGCGGAGGAG
CTGACCATCT TTCTGCGCGG TCAGGGTCAT GCCGTCGCCA CCTATCACGG TGGCATCGAG
GCGGCCGAGC GCATCGTCGC CGAGGAGGAT CTGCTCGCGA ACCGGGTCAA GGCGCTGATC
GCCACCAGCG CGCTCGGAAT GGGCTTCGAC AAGCCGGACC TCGGCTTCGT CGTCCACATC
GGAGCTCCGT CGTCGCCGAT CTCCTACTAC CAGCAGATCG GCCGGGCCGG CCGGGCGCTC
GACACGGCCG AGGTCGTGCT CCTCCCGGCG GCTGAGGACC GGGACATCTG GCGCTACTTC
GCGGACACCT CTTTTCCGCC GGAGCACGTC GTCCGCCGGG TGCTCGGAGT GCTCGCGGGC
GCCGACCGGC CGCTGTCGAC CCAGGCGTTG CTCGCGTCCG TCGACCTCGG CCCCAGCCGA
CTCGACCAGA TGCTGAAGGT TCTCGACACC GACGGGACGG TCCGGCGAGT CAGGGGCGGC
TGGGTGAGTA CCGGTGAGCC CTGGTTGTAC GACGAGGAGC GTTACCGGCG TGTCGCCGCG
GCGCGCTCTC GGGAGCAGCA GGCGATGCTC GACTACATCG TGACGACCGG CTGCCGGATG
GAGTTCCTGC GCCGGCAGCT CGACGATCCC CACGCGGCGG CCTGCGGGCG GTGTGACCGG
TGCACCGGTC GGTCGTGGTC GTCCGCGGTC TCGGAGTCCT CGCGGACGCG GGCCCGGGAT
GAGCTGCGCC GGGCGGGCGT CCCGGTCGAA CCGCGGCGGA TGTGGCCGAC TGGGATGGGC
CGGCTCGGGG TCGACCTGGC CGGGCGTATC CCGGCGTCGG CCGCTGCCGA GCCCGGGCGG
GCGCTCGCCC GACTCAGCGA TGTGGGCTGG GGCAACCGGC TGCGCCCGAT GTTCACGTCT
GCCACCCTCG CTGTGCCCGG CGCCGCTGTG CCCGGCGCCG CTGTGCCCGG CGCCGCTGTG
CCCGGCGCCG CTGTGCCCGG CGCCGCTGTG CCCGGCGCCC TCGACGGCCC GCTTCCCGGC
GATCTCGTCG AGGCGGTGGT CGCAACGCTC GCCGGTTGGG GATGGCAGCG GCGGCCGGTG
GCCGTCGTGT CGATCGCGTC CCGCAGCCGG CCCCGGCTCA TCGCGAGCCT CGCCGAGCGC
ATTTCCACCA TCGGACGCCT GCCGCTGCTG GGGCAGCTCG ACCGGGTCGC CGGCGGGCCG
CACACCGGGC AGGTGCACAA CAGCGCGCAC CGGCTCGCCG GCCTGTGGGA TGCGTTCACG
GTCTCCCCGG CCCTTGCCGC CGCCCTGGGC GAGCTCGGCG GCCCGGTGCT GCTCGTCGAT
GATCGGATCG TCACCGGCTG GACGATGACG GTCGCCGCTC GCCTGCTCCG GCAGGCCGGA
GCGCCGTCGG TGCTGCCGTT CGCGCTCGCG GTGGACACCG CATGA
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| Protein sequence | MFPAGLADPA EPGPGGLRER AEELLRALAG PAAALREDQW QAIDALVTHR RRVLLVQRTG
WGKSAVYFLA TALLRGAAGR AAPTVIVSPL LALIRNQAAA AARLGIRAGE IHSGNVTEWD
EVYAALRSGE LDVLLVGPER LNNPTFRDDY LPELAATTGL LVIDEAHCIS DWGHDFRPDY
RRLRTLVAGL RPRVPVLATT ATANTRVVED VSEQLGTSAP AGPASAGTLV LRGSLDRESL
RLAVVSLPQA EHRFGWLADH LGELPGSGIV YTLTKAAAEE LTIFLRGQGH AVATYHGGIE
AAERIVAEED LLANRVKALI ATSALGMGFD KPDLGFVVHI GAPSSPISYY QQIGRAGRAL
DTAEVVLLPA AEDRDIWRYF ADTSFPPEHV VRRVLGVLAG ADRPLSTQAL LASVDLGPSR
LDQMLKVLDT DGTVRRVRGG WVSTGEPWLY DEERYRRVAA ARSREQQAML DYIVTTGCRM
EFLRRQLDDP HAAACGRCDR CTGRSWSSAV SESSRTRARD ELRRAGVPVE PRRMWPTGMG
RLGVDLAGRI PASAAAEPGR ALARLSDVGW GNRLRPMFTS ATLAVPGAAV PGAAVPGAAV
PGAAVPGAAV PGALDGPLPG DLVEAVVATL AGWGWQRRPV AVVSIASRSR PRLIASLAER
ISTIGRLPLL GQLDRVAGGP HTGQVHNSAH RLAGLWDAFT VSPALAAALG ELGGPVLLVD
DRIVTGWTMT VAARLLRQAG APSVLPFALA VDTA
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