| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0662 |
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| Symbol | |
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| ID | 3902996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 758184 |
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| End bp | 758846 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877995 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_479775 |
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| Protein GI | 86739375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.080094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGG GGGTGAACGG TCATACCGTC CAGGTTGTCC CGGCCGTTGA TCCCGGTGAA
TCGGTCGATC CGCTCGGTTC CGCGGCTCGG GTGGACATCG GGGTGGCGAT CGGCATCCCC
GAGCCGTACC GCACAGAGCT TCAGGACTGG CGGGAGCGAC TCGGCGACCC GAACGCAGCC
CTCATCGTCC CGCACGTCAC CCTGCTGGGT CCGACCTCCG TCGGGTTCGT GGAGCTGCCC
ATGATCGAGC GCCACCTCGC GCAGACGGCG CGGACGAACT CCCCGTTCAC CATCCGCCTG
CGGGGATCCG GCACGTTCCG GCCGTTGTCC CCGGTCGTGT TCGTCGCCCT CGCCATGGGT
ATTCTCCGGT GCGAGAAACT GGCGGCGGTG GTACGGTCCG GTCCTCTCGA CCGGCCGCTC
AGCTTCGCCT ACCATCCGCA CGTCACCGTC GCGCACGATC TTGCCGAGGA CGCGTTAGAT
CGCGCCTTTG ATGCGCTCGC CGAATATCAG GCGCAGTTCG AGGTCAACGG ATTCGGGCTG
TACGAAAGAG GCGCCGACCT GCGCTGGCGG CAACTACGCT TCTTCCCGTT CGGTCGCCCT
GAGCGTGGGC CGGAACCGGT GGGCGGCGGG GGGCGACGCG CCACACTCGG ATCTCGGGAG
TGA
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| Protein sequence | MTEGVNGHTV QVVPAVDPGE SVDPLGSAAR VDIGVAIGIP EPYRTELQDW RERLGDPNAA
LIVPHVTLLG PTSVGFVELP MIERHLAQTA RTNSPFTIRL RGSGTFRPLS PVVFVALAMG
ILRCEKLAAV VRSGPLDRPL SFAYHPHVTV AHDLAEDALD RAFDALAEYQ AQFEVNGFGL
YERGADLRWR QLRFFPFGRP ERGPEPVGGG GRRATLGSRE
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