| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0633 |
|---|
| Symbol | groEL |
|---|
| ID | 3903311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 715686 |
|---|
| End bp | 717326 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637877966 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_479746 |
|---|
| Protein GI | 86739346 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TTCTGACGTT CAACGAGGAC GCCCGCCGCG CGCTCGAGCA CGGGGTGAAC
GCCCTGGCCA ACGCGGTCAA GGTGACGATC GGCCCGCGTG GTCGCAATGT CGTCATCGAC
AAGCACTACG GCGCCGCGAC GATCACCAAT GACGGGGTGA CGATCGCGCG CGAGATCGAG
CTGGAGGACC CCTACGAGAA CCTGGGCGCC CAGCTCGCGA AGGAAGTCGC CACCAAGACC
AACGACGTGG CTGGCGACGG CACCACGACG GCGACCGTGC TAGCCCAGGA GATGGTGCGC
TTCGGTCTCA AGCAGGTGAC CGCGGGGGCC GCCCCACTGA CGCTGAAGCT GGGCATCGAG
GCCGCCGTCG AGGCCGTCTC CGCGGCACTG CTGAAGCAGG CCATCGAGGT CAACTCGAAG
GAGACCATCG CCCAGGTCGC CGCCATCTCC GCTCAGGACC CGCAGGTCGG GGAACTGATC
GCCGAGGCGA TCGACAAGAT CGGCAAGGAC GGCGTCATCA CGGTCGAGGA GAGCCAGACC
CTCGGGCTGG ACCTTGAACT GACCGAGGGC ATGCAGTTCG ACAAGGGCTA CATCTCGCCG
TACTTCGTCA CGGACGCCGA GGCCCAGGAG GCCGTGCTCG AGGACGCCTA CGTCCTGCTC
TACCCGGGCA AGATCTCGGC GCTGAACGAG ATCCTGCCCG TGCTGGAGCA GGTCGTCCAG
GAGCGCAAGC CGCTACTGAT TATCGCCGAG GAGGTCGAGG GCGAGGCCCT GTCCACCCTG
GTGGTGAACT CGATCCGCAA GACCTTCCAG GTCGTCGCGG TCAAGGCTCC CGGGTTTGGG
GACCGCCGCA AGGCACTGCT GCAGGATATC GCCGTGCTCA CCGGCGGCCA GGTGGTGGCC
TCGGAGGTCG GTCTTTCCCT CGACGCGGTG ACGTTGGCCG ACCTGGGCCG GGCCCGGCGG
GTCGTGGTGG ACAAGGACAA CACCACCATC GTTGACGGGG TTGGCGAGGC CTCCTCGATC
GCCGATCGGG TGCGTCAGCT CAAGCAGGAG ATCGAGGTCA GCGACTCCGA CTGGGACCGC
GAGAAGCTGC AGGAGCGGTT GGCCAAGCTC GCCGGTGGGG TCGCGGTCAT CCGCGTCGGC
GCCGCCACCG AGGTGGAGCT CAAGGAGAGG AAGCACCGCC TCGAGGACGC CGTGTCGGCT
ACCCGCGCGG CCATCGAGGA GGGCATCATC GCCGGCGGCG GTTCCGCGCT CACCCACGTG
GCGTCCGTGC TCGATGACGG GCTCGGTCGC ACCGGGGACG AGCTCGCCGG GGTGCGGATC
GTGCGCCGCG CGCTCGACGC CCCGCTGTCG TGGATCGCGC GCAACGCTGG TCTGGAGGGC
GCGGTCATCG TCTCCAAGGT CAAGGAGCTC GAGCCGGGTC GTGGGTACAA CGCGGCCACC
GGCGAGTACA CCGATCTGAT CGCGGCCGGC GTCATCGACC CGGTCAAGGT CACCCGGTCG
GCGGTGGCGA ACGCCGCCTC GATCGCGGCT CTGCTCATCA CCACCGAGGG CCTGGTCGTC
GAGAAGCCGG CGGAGCCCGC TCCCCAGGAC GGCCACGGCC ACGGCCACGG GCACAGCCAC
CCGCAGGGCC CGGGTTTCTG A
|
|---|
| Protein sequence | MPKILTFNED ARRALEHGVN ALANAVKVTI GPRGRNVVID KHYGAATITN DGVTIAREIE
LEDPYENLGA QLAKEVATKT NDVAGDGTTT ATVLAQEMVR FGLKQVTAGA APLTLKLGIE
AAVEAVSAAL LKQAIEVNSK ETIAQVAAIS AQDPQVGELI AEAIDKIGKD GVITVEESQT
LGLDLELTEG MQFDKGYISP YFVTDAEAQE AVLEDAYVLL YPGKISALNE ILPVLEQVVQ
ERKPLLIIAE EVEGEALSTL VVNSIRKTFQ VVAVKAPGFG DRRKALLQDI AVLTGGQVVA
SEVGLSLDAV TLADLGRARR VVVDKDNTTI VDGVGEASSI ADRVRQLKQE IEVSDSDWDR
EKLQERLAKL AGGVAVIRVG AATEVELKER KHRLEDAVSA TRAAIEEGII AGGGSALTHV
ASVLDDGLGR TGDELAGVRI VRRALDAPLS WIARNAGLEG AVIVSKVKEL EPGRGYNAAT
GEYTDLIAAG VIDPVKVTRS AVANAASIAA LLITTEGLVV EKPAEPAPQD GHGHGHGHSH
PQGPGF
|
|---|
| |