Gene Francci3_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0630 
Symbol 
ID3903308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp713983 
End bp714567 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID637877963 
ProductMarR family transcriptional regulator 
Protein accessionYP_479743 
Protein GI86739343 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCG GGCTTCCCCC GGGGCTGGAG AGCCTCCCCG ACGGCCCGGG GAAGGACCTC 
GGCTGGCTAT TGGGGCAGGT GCGGTACGGC TATGCGGCCG CTTCGGCCGC CGCCGTCGGC
CGGGTGCCCG GCGGGCTGCG TGGGCTGCAC GTTCTCGGTG CCGCGGTCGA GGGTGAGGCG
CGCAACCAGA TCGAGGTGGC CCGTCGGTTC GGCATCGACC GGACGGTGAT GGTCCGCCTG
GTCGATGATC TGGAGCGGGC CGGCCTGGTT GAGCGGCACC CCGATCCCGC GGACCGGCGG
GCCCGGATCA TCACCGCGAC GGAGCACGGG GTCCAGTTGT ACCGGGCCAG CCAGGAGGAT
CGGCTTCTCG TCGATCAGCA CGTGCTCTCC CCGCTGACTG CGGCGGAACG GGCGACCTTC
ATCGATCTGT TGCGGCGTGT CGCTGCCCAC ATGCTTGCCG TGGACCCCAC GCACGGAGCG
GCCGCCTGCG ACGCCGCCAG GCGGGAGATC GACGCGCGGG ACATTGGGAT GGCGTGCGCA
CCGGACGGGA CGTGCCCCGG TCAGTCGGCC CCGTCCGACG GGTAG
 
Protein sequence
MAAGLPPGLE SLPDGPGKDL GWLLGQVRYG YAAASAAAVG RVPGGLRGLH VLGAAVEGEA 
RNQIEVARRF GIDRTVMVRL VDDLERAGLV ERHPDPADRR ARIITATEHG VQLYRASQED
RLLVDQHVLS PLTAAERATF IDLLRRVAAH MLAVDPTHGA AACDAARREI DARDIGMACA
PDGTCPGQSA PSDG