Gene Francci3_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0620 
SymbolacpS 
ID3903488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp704466 
End bp704822 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content73% 
IMG OID637877953 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_479733 
Protein GI86739333 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.151819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.677083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTGG TGGGCGTCGG AGTGGACGTG GTGGATGTCG ACCGGTTCGC CGCGACGCTG 
GCGCGCACGC CGGGCATCGC GATGAGGCTG TTCACCGCGA CCGAACGCGG CCTCGCCCGG
CCTGAGCGGT TGGCTGCCCG GTTTGCGGCG AAGGAGGCGG TCGCCAAGGT TCTCGGCGCA
CCCCCCGGTC TCGAGTGGCA CGACACCGAG GTTGTTCTCG GTACCGGGGG GCGACCGTCG
TTACGGATCA TCGGCACGGT GGCCGCCGCG GCGGCCCGGC TCGGCATCGC GTCCTGGCAC
CTCTCGCTCA CCCACGACGG CGGCGTGGCC GTGGCGATGG TCGTCGCCGA GACCTGA
 
Protein sequence
MAVVGVGVDV VDVDRFAATL ARTPGIAMRL FTATERGLAR PERLAARFAA KEAVAKVLGA 
PPGLEWHDTE VVLGTGGRPS LRIIGTVAAA AARLGIASWH LSLTHDGGVA VAMVVAET