| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0575 |
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| Symbol | |
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| ID | 3905745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 670766 |
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| End bp | 671680 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877908 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_479688 |
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| Protein GI | 86739288 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTACG AGGATGAGGC CATTCTCGTG CTCGACAAAC CCGTCGGCAT CTCGGTCATG
GGAGAGCGGC ACGACACCGA TCTCGTCACC CTCGCCGGGG ATGACGGCGA GGAGCTGTTC
CCGGTGCACC GCATCGACAA GGTCACCTCG GGCCTGGTGC TCTTCGCCCG GCAGTTGCGG
TTCCACGGTG ATCTCACCCG GCAGTTCCAG CGCCGCACGG TGGACAAGCG CTACCTCGTC
CTGACCCGCA CCCGCGGACT GCCCGCCTCG GGGACCGTCG ACCTGCCGCT GAGTGTGGGG
CGCAAGAGTC GGGTCCGGGT GGCGGCGAAC CGGGCCGACA TCATGGCCGA CCTGGCGGAG
GTGGCCCCCT TGGCGGAGGT GGCCGACCTG GGGGAGGTGG CCCCCTTGGC GGAGGTGGCC
CCCTTGGCGG AGGTGGCCGA CCTGGGGGAG GCGGCCCCCT TGGCGGAGGC GGCCCGGGCA
GAGGTTGGCC CGACCGGCGC CGGCGCCGGC GCCGGCGTCG GACGCTGGAC GGTTCCGCCC
GCCGCGGTGT TTCCCCACGT CCGGACATAC CCGTCCGTCA CGACCTTCAT CCGGGTGTGG
GAGGGCGGTG AGTACACCCT GCTCGCGGTC ACGCCGGTCA GCGGGCGGCG CCACCAGATC
CGGGTGCATC TGGCCTGGAT CGGGCACCCG ATCGAGGGCG ATCCGCTGTT CGGCCGCGAT
GCCACCGCCC GCACCCTGCT GCACTCGTGG CGGCTCGCCT TCGATGCGGC TTGGGCCGGC
GGCTCCCGCA TCGAGGTCGA GGCGCCCCCC GGAGCCGACT TCTGGGCCCC GGTACGCACG
CATCTGCCGG CCGGCCTGGC GGCGACCCTC CTCGGAAACG TGGCGGGTGG GTCAGGAATA
GGCGGTTTCG CGTAG
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| Protein sequence | MIYEDEAILV LDKPVGISVM GERHDTDLVT LAGDDGEELF PVHRIDKVTS GLVLFARQLR
FHGDLTRQFQ RRTVDKRYLV LTRTRGLPAS GTVDLPLSVG RKSRVRVAAN RADIMADLAE
VAPLAEVADL GEVAPLAEVA PLAEVADLGE AAPLAEAARA EVGPTGAGAG AGVGRWTVPP
AAVFPHVRTY PSVTTFIRVW EGGEYTLLAV TPVSGRRHQI RVHLAWIGHP IEGDPLFGRD
ATARTLLHSW RLAFDAAWAG GSRIEVEAPP GADFWAPVRT HLPAGLAATL LGNVAGGSGI
GGFA
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