| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0550 |
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| Symbol | |
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| ID | 3904201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 638324 |
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| End bp | 640012 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637877879 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_479663 |
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| Protein GI | 86739263 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.291589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACAG TCCCCTGGTT GACGATCATG TTGATCGTCC CGGCCGCGGG TGCGGTGGTC
GTCGCCGCTC TGCCCCGCCG GCTGTCGACC CTCGCCAAGC AGCTCACCCT CGGGCTCTCG
CTGGCGGTTC TGGTGCTCGC GGTCCTTGCG ACCGCGGCCT ACAACCCGGA CAAGGCCGGC
TTCCAGTTCG CCCAGTCCTA CGACTGGATC AAAACCTTCG GCATCTCCTA CTCGGTGGGG
GCCGACGGCA TCTCGCTGGT GCTGATCCTG CTTGCCGCGC TGCTGGTGCC GGTCGTGGTC
CTGGCGTCCT GGGACGAGGC AGGCGCGGAT GGCGGGACGA CCGGTGCGAC GGATCCGACC
GGCGCGGCCG CCGTCGGCGC GGCCGCCGTC GGGGTGGACG GCGCCGGGGT GGACGGCGCC
GGGGTGGACG GCGCCGGGGT GGACGGCGCC GGGACGCGGA GCAGGCGGTC GGTCCCGGCG
TTCTTCGCGC TGCTGCTGGC GCTGGAGGCC GGGATGATCG GCGTGTTCGC CGCTACCGAC
GTCTTCCTGT TCTACGTCTT CTTCGAGGCG ATGCTCATCC CGATGTACTT TCTCATCGGG
AGCTACGGCC CGGTCCGGGA GCAGGCCCAG CGCTCCTACG CGGCGGTCAA GTTCCTGCTC
TACAGCCTCT TTGGCGGCCT GCTGATGCTC GCTGCCGTGA TCGGACTGTA CGTCGTCTCC
GCCGACAACC TCGGCAGCGG AACCTTCGAC TTCGCCACCC TGCGGCAGAT GGACATCACC
CCCGGGGTGC AGAAGCTGCT GTTCCTCGGT TTCTTCCTGG CGTTCGCCAT CAAGGCCCCC
CTGTTCCCGT TCCACACCTG GCTGCCCGAC GCCGGCGCGC AGTCGCCCAC CGGCGGCGCG
GTGCTGCTGG TCGGGGTGCT GGACAAGGTG GGCACGTTCG GACTGATCCG GTACTGCATC
CCGCTGTTTC CCGACGCGGC CGACTACTTC GCCCCGCTGG TGCTTGGTCT GGCGGTGATC
GGCATCTTCT ACGGCGCCCT GCTCGCCATC GGGCAGCGGG ACATGAAACG GCTGGTCGCC
TACACCTCGC TGGCCCACTT CGGCTTCATC GCGCTGGGCA CCTTCGCCTT CACCTCCCAG
GCGGGCAGCG GCGCGGTGCT TTACATGGTC AACCACGGCC TGTCCACCGG CCTGCTTTTC
ATGGTCGTGG GCTTCCTGGT GGCGCGCCGC GGCACTCGTG ACGTCGGTGC TTACGGCGGC
CTGGCCAGGG TGACGCCGGT GCTTGCCGGG GTGTTCCTCG TCGCCGGACT GTCGTCGTTG
GCGTTGCCTG GAACGAACAG CTTCGTCAGC GAGTTCCTGG TGCTGGTGGG GACGTTCACC
CGGAACAGGC CGCTGGCGAT CGTCGCGACC ACCGGCATCG TGCTGGCCGC GATCTACATC
CTGTACCTCT ACCAGCGGAC GATGACCGGA CCGGTGGTGC ACGAGGAGAA CAAGGTCCTG
GTCGACCTCA GCCTGCGCGA GAAGCTCGTC GTCGCCCCGA TGGTCGCGCT CATCGTCGCG
CTCGGGGTCT ACCCCAAGCC GCTGCTCGAC ATCATCACGC CGACGGTGAC GGCGACCTAC
GCCGATATCG GCAAGTCTGA CCCGGCTCCG ACGCACTCGG TGGCCGCGGA GTCCGGAGGC
CACTCGTGA
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| Protein sequence | MHTVPWLTIM LIVPAAGAVV VAALPRRLST LAKQLTLGLS LAVLVLAVLA TAAYNPDKAG
FQFAQSYDWI KTFGISYSVG ADGISLVLIL LAALLVPVVV LASWDEAGAD GGTTGATDPT
GAAAVGAAAV GVDGAGVDGA GVDGAGVDGA GTRSRRSVPA FFALLLALEA GMIGVFAATD
VFLFYVFFEA MLIPMYFLIG SYGPVREQAQ RSYAAVKFLL YSLFGGLLML AAVIGLYVVS
ADNLGSGTFD FATLRQMDIT PGVQKLLFLG FFLAFAIKAP LFPFHTWLPD AGAQSPTGGA
VLLVGVLDKV GTFGLIRYCI PLFPDAADYF APLVLGLAVI GIFYGALLAI GQRDMKRLVA
YTSLAHFGFI ALGTFAFTSQ AGSGAVLYMV NHGLSTGLLF MVVGFLVARR GTRDVGAYGG
LARVTPVLAG VFLVAGLSSL ALPGTNSFVS EFLVLVGTFT RNRPLAIVAT TGIVLAAIYI
LYLYQRTMTG PVVHEENKVL VDLSLREKLV VAPMVALIVA LGVYPKPLLD IITPTVTATY
ADIGKSDPAP THSVAAESGG HS
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