| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0541 |
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| Symbol | |
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| ID | 3904192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 626964 |
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| End bp | 628412 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637877870 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_479654 |
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| Protein GI | 86739254 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.482391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.20204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA ACACGTCGAC TTCCTCCACC ACGGACGATC TGACCACCGG GGCTCCCAAC
GGCACCGGGG CCCCCGACGG CGCGAACGGC GTCGGGGGCC CGACCGGGAC CGTCGGCGGA
CCCGGGGAGC ATCCGGCCTA CGAGGCCGGC TTCACCGAGT CGGCGAACGG GCGGGTCTAC
ACCGTCACCG GCAGCGACTG GGAGCAGATC CTCGGCGTCG GCGAGGAGGA GAACGAGCGG
ATCGTCGTCA ACATGGGGCC GCAGCACCCG TCGACCCACG GGGTGCTCCG CCTGGTCCTG
GAGATCGAGG GCGAGACGGT CACCGAGACC CGCCTCGTCA TCGGCTACCT GCACACCGGC
ATCGAGAAGA GCTGTGAGTA CCGCACCTGG ACTCAGGCGG TCACCTTCCT CACCCGGGCG
GACTACCTCT CGCCGCTGTT CAACGAGGCG GCCTACTGCC TGTCGGTGGA GAGGCTGCTG
GGCATCACCG AGCAGGTACC CGAGCGGGCC ACGGTGATCC GGGTGATGGT GATGGAGCTC
CAGCGGATCG CCTCGCACCT GGTGTGGCTC GCGACCGGCG GCATGGAGCT CGGCGCCACC
ACCGCCATGA TCTTCGGTTT CCGGGAGCGG GAGAAGGTCC TCGACCTGCT CGAGCTCATC
ACCGGGCTGC GGATGAACCA CGCCTACATC CGGCCCGGGG GCCTCGCCCA GGATCTCCCC
GACGGCGCCG AGCGGGCCAT CCGGGCGTTC CTCGCGGACA TGCCGAAGCG GATCAGGGAG
TATCACGCGC TGCTCACCGG CCAGCCAGTC TGGAAGGCCC GGATGGTCGA CGTCAACGTT
CTCGACGCGG CCGGCTGCAT CGCGCTGGGG ACCACGGGCC CGGTGTTGCG CGCCGCGGGC
CTGCCGTGGG ACCTGCGCAA GACCATGCCC TACTGCGGCT ACGAAACCTA CGAGTTCGAC
GTGCCGACCG CGCTGGAGGG CGACTCCTTC GCCCGCTACC TGGTGCGGCT GGAGGAGATG
GGCGAGTCAC TCAAGATCGT TGATCAGTGT CTGGACCGGC TGCGTCCCGG CCCGGTCATG
GTCGCCGACA AGAAGATCGC CTGGCCGTCC CAGCTTTCTG TCGGGTCCGA CGGGACGGGC
AACTCACTCG CGTACATCCG GAAGATCATG GGGACCTCGA TGGAGGCCCT GATCCATCAC
TTCAAGCTGG TGACCGAGGG ATTCCGCGTC CCGGCCGGTC AGGTCTACAC CCAGATCGAG
TCGCCGCGCG GAGAGCTCGG CTACCACGTG GTCAGCGACG GCGGCACGAG ACCCTTCCGC
GTCCACGTGC GGGATCCAAG CTTCGTCAAC CTGCAGGCCG TCCCGGCGCT GACCGAGGGC
GGCCAGGTGG CGGACGTGAT CGTCGGGGTC GCCTCAGTCG ACCCGGTGCT CGGGGGAGTT
GATCGTTGA
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| Protein sequence | MTTNTSTSST TDDLTTGAPN GTGAPDGANG VGGPTGTVGG PGEHPAYEAG FTESANGRVY
TVTGSDWEQI LGVGEEENER IVVNMGPQHP STHGVLRLVL EIEGETVTET RLVIGYLHTG
IEKSCEYRTW TQAVTFLTRA DYLSPLFNEA AYCLSVERLL GITEQVPERA TVIRVMVMEL
QRIASHLVWL ATGGMELGAT TAMIFGFRER EKVLDLLELI TGLRMNHAYI RPGGLAQDLP
DGAERAIRAF LADMPKRIRE YHALLTGQPV WKARMVDVNV LDAAGCIALG TTGPVLRAAG
LPWDLRKTMP YCGYETYEFD VPTALEGDSF ARYLVRLEEM GESLKIVDQC LDRLRPGPVM
VADKKIAWPS QLSVGSDGTG NSLAYIRKIM GTSMEALIHH FKLVTEGFRV PAGQVYTQIE
SPRGELGYHV VSDGGTRPFR VHVRDPSFVN LQAVPALTEG GQVADVIVGV ASVDPVLGGV
DR
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