Gene Francci3_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0534 
Symbol 
ID3905445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp620383 
End bp621465 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content74% 
IMG OID637877863 
Productadenosine deaminase 
Protein accessionYP_479647 
Protein GI86739247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC CCTCCGGATT CGCGGTCCCG TCCCCGACCG GGCCGAAGAT CGAACTCCAC 
GTCCATCTGG AGGGCACGGT CCGTCCCGCC ACCCTGCTGG AGATGGCGCG CCGCAACTCC
GAGGCGCTGC CTGCCCGCAC GGTCGAGGGC CTCGCGGACC TCTACCGCTT CCGCGACTTC
GACCACTTCC TGAAGGCCTG GATCCTCACC ACCCACGTGA TGCGGACGGA GGCCGACTTC
CGCCAGGTGG TCGTCGACTA CGCCGCCGAG GCGGCCCGGG CGGGCGCCGT CTACCTGGAG
GGCATCTTCT CGCCCTGGTT CCGGGTCCAT CGGGGGGTCC GCGTCGAGGA GATCTTCCAC
GGCTACGCCG ACGGGGCGAT CGAGGCCCGG GAACGCTATG GCGTCGAGGT GCGCCTCACC
CCGGACATCG AGCGGGTGCT GCCGGTCGAG GCCGCGATGG AGGTGGCGCG GTGGGCGGTG
CGGTTCGCCG ATCGCGGTGT CGTCGGCATT GGGCTCGGCG GACCGGAGGT CGGTCATCCC
CCCGAGCCGT TCGCGCCGGC GTTCGCACTG GCCGCCGACG GCGGGCTCGC CGCGGTCCCG
CACGCGGGGG AGACGGCGGG CCCGGTGTCC GTACGGGGCG CGCTCGACGC GCTGGGAGCC
AGGCGGATCC GGCATGGGAT CCGGGCCGCC GAGGACCCCG AGCTGATGCG ACGGCTGGTC
GATCAGGGGA TCGTGCTGGA CGTCTGCCCG GTGTCCAACC TGCGGACTCG GTCGGTGGCA
TCCCTCGACG ACCACCCCTT GGCGGCGTTG CTGCGGGCCG GGGTCGCGTG CTCGCTTGCC
ACCGACGATC CCGCTATGTT CGGCACCGAT CTGGAGACGG AGCACGCGGT CGCGGCAGGG
CTCGGTGCCC GGGCCCGCGA CCTGTACACC GCCGGGGTCG CGGGCGCGCT GTGCGACGAG
CCGACCCGCA CGCGGCTGCG GCGGATCGGC GAGAGCACCG ACTGGGACAC CGTCGAGAGG
GCCGCCCGCG ACGCCTCGGC GGCGGCCTCG GCGCGGTTCG GCGGCGGGGA AGGGGCATGG
TGA
 
Protein sequence
MSDPSGFAVP SPTGPKIELH VHLEGTVRPA TLLEMARRNS EALPARTVEG LADLYRFRDF 
DHFLKAWILT THVMRTEADF RQVVVDYAAE AARAGAVYLE GIFSPWFRVH RGVRVEEIFH
GYADGAIEAR ERYGVEVRLT PDIERVLPVE AAMEVARWAV RFADRGVVGI GLGGPEVGHP
PEPFAPAFAL AADGGLAAVP HAGETAGPVS VRGALDALGA RRIRHGIRAA EDPELMRRLV
DQGIVLDVCP VSNLRTRSVA SLDDHPLAAL LRAGVACSLA TDDPAMFGTD LETEHAVAAG
LGARARDLYT AGVAGALCDE PTRTRLRRIG ESTDWDTVER AARDASAAAS ARFGGGEGAW