| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0464 |
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| Symbol | |
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| ID | 3903195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 542550 |
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| End bp | 543908 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877795 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_479579 |
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| Protein GI | 86739179 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.364922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.192606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGTA TTCGCCGAAT ACTGCCGCTG CCCGTCGCCG CCACGATGAT CATCCTGACC
GCGTGCGGCG GCGGTGGTGA CGCGAGCCCG GCAGACCCCG CGGAGAGCCT GCGCCCCACG
GCCCGTCCAG CCGACGCCGG CGTCGACAAC GTGGCGGGCG CCAAGGCGTC GCCCGCCTGC
GTGGCCCAGG TCAAGACGCT GCGGATGTCC GCCGTCGGCA CGCTCAACGA CGTCGCGAAA
TCCGGCAAGG CCTATCTGGA GAAGGCGCAT CCCGGCCTCA CCGTGGACCT CAACACGAGT
GCGCCGGACT ACACCTCCCT CGTCCAGCAG ATCAGCGCCG ACCGCTCGGC CGGCCGTTCC
GTCGACGTGG CGGTCGCCGG CTTCGACCTG CTCCCGACCT TCGCCCGGGA CCTCGGCGCC
CAGGAGCTCT CCCCACGCCT GCTGCGCGCG TCCTACGACC AACGGCTGGT CGGCCTCGGG
CAGGTCGCCG GGAAGCAGAT CGGCATTCCC CAGCAGGTGT CGTCTCTGGC CCTGGTCTAC
AACCTCGACG TGCTGCAGAA GGCCGGCGTC GATCCGGCGA CGCTGGGCAC GACCGACGGG
GTGATCGCCG CCGCCGACAA GATCAAGGCT TCGGGTCAGA ATATCCAGCC CCTCGACCTG
CCGACCGGCC AGCAGTTCGG GCAGTGGATC CTCAACACCC TGGCCAGCTC CAAGGGGACG
CCGATCCAGG ACGCGAACGG TCGGCCCGCC CTGAACACCC CGGCGGCCCG CGAGGCCGCC
GCGTTCCTCG CGAAGGCCGC GAGCTACGGC ACGCACTCCG CCGATCCGAC CCAGCAGGGC
CTGCTGCGGT TCGGCATCCG CCGGCAGACG GCGATGACCG CCGTGACGGT GGCCTCCGTG
GCCGGCGGGC TGAAGTTCAT CGCGGGGCAG GGGACGAAGG GTTTCCGGGC CGGCGCGGTC
CCGTTCCCGA CTCTGCCCGG CGGGACCCAG CACCCGGTCG CGGGCGGCAA CGCGCTGACG
GTCCTGTCCA CCGACCGCTG CCAGCGGGAG ATGGCGACCG AACTGGTCGT GTCGCTGCTT
TCGCCGGACG TCGTGGCCGC GAGCACGGAG GCGTTGAGCT ACATCCCGGT GGATACTCAG
GCCGTCAGCC AGCTCGGGTC GTTCTACGAG ACCTATCCGC AGCTCAAGCC GTTCAACGCG
CTCATCCCCT CGCTGGTGAA GGCGCCGGCT TGGAGCGGGG CCCGCGGCGG GGAGGTCCCG
AGCGCGATCT CGGACCAGGT GCAGCGCATC CTTAAGGGCG AGGACCCGGT CAGGGCCCTC
GCCGCGGCCC AGAGCCAGGC TGTGGAACTC ACCCGTTGA
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| Protein sequence | MIRIRRILPL PVAATMIILT ACGGGGDASP ADPAESLRPT ARPADAGVDN VAGAKASPAC
VAQVKTLRMS AVGTLNDVAK SGKAYLEKAH PGLTVDLNTS APDYTSLVQQ ISADRSAGRS
VDVAVAGFDL LPTFARDLGA QELSPRLLRA SYDQRLVGLG QVAGKQIGIP QQVSSLALVY
NLDVLQKAGV DPATLGTTDG VIAAADKIKA SGQNIQPLDL PTGQQFGQWI LNTLASSKGT
PIQDANGRPA LNTPAAREAA AFLAKAASYG THSADPTQQG LLRFGIRRQT AMTAVTVASV
AGGLKFIAGQ GTKGFRAGAV PFPTLPGGTQ HPVAGGNALT VLSTDRCQRE MATELVVSLL
SPDVVAASTE ALSYIPVDTQ AVSQLGSFYE TYPQLKPFNA LIPSLVKAPA WSGARGGEVP
SAISDQVQRI LKGEDPVRAL AAAQSQAVEL TR
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