Gene Francci3_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0457 
Symbol 
ID3903263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp535227 
End bp536354 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content76% 
IMG OID637877788 
Producthypothetical protein 
Protein accessionYP_479572 
Protein GI86739172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.282782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAACT CCTCCCGTCG GGAGCCGCGG CTCGCGGCCG GACGGGCGCG TGCCCTCGGG 
ATGCCCACCC GGGGTACCAC CGCGCCGAAC CGGTTGCGAC GGATCGATCG CTGGACGCTC
GACGCGGCCG CCGCGCTGCT GCGTGGGGCG GCGGATCCCC TGGTCGTCGA TCTCGGCTTC
GGCGCGTCTC CGGTGACCAC GGTGGAGCTC TACGAGCGGC TGCGAACGGT GCGTCCGGGC
GTGCGCGTCG TCGGCCTGGA GCTCGACCAG GACCGGGTCA CCCGGGCCGC TCCGGCCGCG
AGACCTCCCG GGCTGCGGTT CACCCGCGGC GGGTTCGAGC TTCCGCCGCC AGGGGAGCGC
CCGGTGCTGG TGCGTGCCCT GAACGTGCTA CGGCAGTATC CCGAGGCGGC GGTCCCCGGC
GCGTGGGCGA CGATGCTGGC GCGGCTCGCC CCGGGCGGGA TGCTCGTCGA GGGAACCTGC
GATGAGACGG GTCGGCGCGC CTGCTGGTTC GGTCTTCCGG CCCCGGGAGC GGCGCCGGCC
TGGCTGCCGT CCGGCGCGCG GGGCCCGGCC GGGCCCACGC TGACCCTCTC CGCGCATCTG
GCGAGCCTCG CCCGTCCGTC CGAGCTCGCC GAGCGGCTCC CCAAGGCGCT CATCGAGCAC
AACGTGCCCG GCCATGACGT CCACCGGCTG TTCACGGCCT TCGACCGCGC CTGGGAGCGG
GCCGCGCCGC GGGCCGTCTT CTCCCCACGC CAGCGGTGGA TCGCAGCCGT GGCGGATCTG
CGGGCCCAGG GCTGGCCGGT CCGCGGCGAC CGGCGGCGCT GGCGGCTGGG CGAGCTGACC
ATCGACTGGC CCCCGGCGGG CGGTTCGGGC GTTCTGCCGG TGCGGTGCGG GACGCCCCAG
CGGAGATCTG ACGGGACGTC CCGGATCGTG GATCCGTCGG TCCCGCGTTC AGTCGGCGGG
ACGGCGGGTC ACGGCGATCT TGTCGAGCAC CGCGAGGTCG TCCGCGCGGG GCTGCCACTG
ACCGGCCACG GCATTGGCGC GCACCTGGAC CGGGCTGGTC GCGCCGGCGA TGACCGAGGC
GACCCCGGGC TGGGCGGCCA GCCCGCCGAT CGTGACGTCC AGCAGTGA
 
Protein sequence
MTNSSRREPR LAAGRARALG MPTRGTTAPN RLRRIDRWTL DAAAALLRGA ADPLVVDLGF 
GASPVTTVEL YERLRTVRPG VRVVGLELDQ DRVTRAAPAA RPPGLRFTRG GFELPPPGER
PVLVRALNVL RQYPEAAVPG AWATMLARLA PGGMLVEGTC DETGRRACWF GLPAPGAAPA
WLPSGARGPA GPTLTLSAHL ASLARPSELA ERLPKALIEH NVPGHDVHRL FTAFDRAWER
AAPRAVFSPR QRWIAAVADL RAQGWPVRGD RRRWRLGELT IDWPPAGGSG VLPVRCGTPQ
RRSDGTSRIV DPSVPRSVGG TAGHGDLVEH REVVRAGLPL TGHGIGAHLD RAGRAGDDRG
DPGLGGQPAD RDVQQ