| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0448 |
|---|
| Symbol | |
|---|
| ID | 3903254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 529425 |
|---|
| End bp | 529844 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637877779 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_479563 |
|---|
| Protein GI | 86739163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.933593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGATC CTCGTGGGAT GCGGTTCGCC GCTGCCGTCA CCACGATCAT GCTCGCCGTG
ATACTGCTCG CCGGCAGCCG CTGGTTGCTG CTCGCGCAGA CCGTGGTGTT CGGGGTGGGG
GCGGTGGCCG GGGTCCGGCA CGCGCCCTAC GGGCTGGTGT TCCGTTCCCT GATCCGGCCG
AGGCTGGGGC CGCCGGCCGC CACCGAGGAC GCCGCGCCGC CCCGGTTCGC CCAGCTGGTC
GGCGCGATCT TCGGCGTCGT GGGTCTCGTG GGATTCTTCG CGGGGATGCC GGCACTCGGT
TACGTCGCGG TGGCCCTGGC CTTCGTGGCG GCCCTCCTCA ATGCGGCGTT CGAGTTCTGT
CTCGGGTGCC AGCTGTATCT TTTTCTCCAT TCGATAGCCG TGAAAGGAGC ACGCACATGA
|
|---|
| Protein sequence | MVDPRGMRFA AAVTTIMLAV ILLAGSRWLL LAQTVVFGVG AVAGVRHAPY GLVFRSLIRP
RLGPPAATED AAPPRFAQLV GAIFGVVGLV GFFAGMPALG YVAVALAFVA ALLNAAFEFC
LGCQLYLFLH SIAVKGART
|
|---|
| |