Gene Francci3_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0405 
Symbol 
ID3903647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp476627 
End bp476818 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content70% 
IMG OID637877734 
Productexcisionase/Xis, DNA-binding 
Protein accessionYP_479521 
Protein GI86739121 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.831547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGC TCCTGCTCAC CCCGACGGAA GCCGCTGACC TGCTCGGCGT CAGCCGCAGC 
ACCGTCTACG AACTGCTGAA CAGCGGCGAC CTCGAATCCG TCCGCATCGG CCGTGCCCGC
CGGATCCCCT CCGCCTCGCT GCTCGCCTTC GTCCACCGGC TCCGCGGCCT CGACGACGGA
CAGGCAGCAT GA
 
Protein sequence
MTKLLLTPTE AADLLGVSRS TVYELLNSGD LESVRIGRAR RIPSASLLAF VHRLRGLDDG 
QAA