| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0394 |
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| Symbol | |
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| ID | 3903636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 467350 |
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| End bp | 468570 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637877723 |
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| Product | cupin 4 |
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| Protein accession | YP_479510 |
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| Protein GI | 86739110 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGG ATCATCAGCT CATCCGCGAT ATAAAGACCG CGTTGGCATG GTCCAGACCC
AGCTCGACAC CCTCCCGGTT CCTACGGGGG ACTCTTCCTG ATTCTGGGAT ATGCCCCAGG
GTGCTCACGC CGACCAGATT TCTAGACCTG ATAATGAGAC GAAGCCTTGT CTCGCCCCAG
ATGCGGTGCT TTCAAAACGA ATCAGAGCTG CATCCAAACT CCTTGCTTCA GATGAACACG
ACGAGGCGAG GGCAGGTCAC TCCGATGGTC GATATGCGCC GGCTGGCCGG ACTTTTGCAA
TCAGGCTGCA CCCTGGTGTT GGACGCGGTC AACCACTTTG ATCCGACGCT AGAGGTTGCG
TGCCGAGCGT TTCAATGGTG GTTGCGCGCG CCTGTGCAGG CGAACGTGTA CCTCACAACG
GGCGACGCGG CGGGTTTCTC CCTACACTGG GATGATCACG ACGTCATCGT CCTACAGTTA
GCTGGCGACA AAGAGTGGGA GGTCCGGGGT CCGTCTCGCC GTGCTCCCAT GTACCGCGAC
GCCGCACCCA ATACTGAGCC TCCCAAAGAC ATCGTGTGGT CTGGTACCGT GAATACCGGT
GACGTGTTGT ATATTCCCCG GGGCCACTGG CATCGGGCGA GCCGCACCAG CAGAGGTGAC
GGGTTTAGCC TTCATGCTAC CTTTGGGTTC ACGAGACGAA CGGGCGTCGA TTGGTTGGCT
TGGCTTGCGG ACCAGTCGCG CCGCGAAGAG GTGTTTCGGG AGGATCTGAA TCAGCGGGGA
GAAGACCCGA AAGAACATCA AAACGACGGC GAGAAAATTA TTGTTGCCGC ATCGCGTCTT
CTTACGTCAC ATCCGCCGGC CCATTACTTG GAATCCGTGG CGCATGCCAC CTCCGCAGGC
CGGTATGTCT CCACAGCCGG CATTTTTGGT CCGCCATCCG CGGTCGTGTG CGTTACTGAT
TTTCCACCTC AGATAGAGAC CCAGGGCGAT ACAGTGGCGG TCGCGACGGC GGAGAAACGG
ATCGTCTTCA CCAGGAAAGC ATTACCAGCC CTTGGGTTGC TTCTGTCGGG CAATCCTGTG
TGCCTTGACT ACGTATCGTC CGCAGCGGGG ATCGATGGCG CGCGCCTTGG GGAGATACTT
GTCCGGGAGG GCATATGCGC GGAACTGACT CCGGAATTAT TCTCGGGCTA TACCGGTCTG
ACCACAGACG GCAAGCTTTA G
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| Protein sequence | MLMDHQLIRD IKTALAWSRP SSTPSRFLRG TLPDSGICPR VLTPTRFLDL IMRRSLVSPQ
MRCFQNESEL HPNSLLQMNT TRRGQVTPMV DMRRLAGLLQ SGCTLVLDAV NHFDPTLEVA
CRAFQWWLRA PVQANVYLTT GDAAGFSLHW DDHDVIVLQL AGDKEWEVRG PSRRAPMYRD
AAPNTEPPKD IVWSGTVNTG DVLYIPRGHW HRASRTSRGD GFSLHATFGF TRRTGVDWLA
WLADQSRREE VFREDLNQRG EDPKEHQNDG EKIIVAASRL LTSHPPAHYL ESVAHATSAG
RYVSTAGIFG PPSAVVCVTD FPPQIETQGD TVAVATAEKR IVFTRKALPA LGLLLSGNPV
CLDYVSSAAG IDGARLGEIL VREGICAELT PELFSGYTGL TTDGKL
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