| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0381 |
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| Symbol | |
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| ID | 3903432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 452158 |
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| End bp | 454236 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877710 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_479497 |
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| Protein GI | 86739097 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAACGT ATATAGCAGC ATTGCTGCTC GGCCTTGGCC CGGGGGCCGT GTACGCGGCG
CTCGGGCTAG GGCTCGTGCT CACCTACCGC GCGTCCGGCG TGGTGAACAT CGCCCATGGG
GCGTTCGCTA TGTACGCCAC CTACCAGTAC GCAGAACTAC GGGAGGTCGG GGACCTCGTA
CTGCCCGTCG TCGGGATGCC GCCAAGAATT CATCTCACCG ACACGCCCAC CTTCGGGCTA
GCCCTGTCAG TATCCCTCGC AATGGCGGCA ATTCTAGCAC TGGCATCCTA TCTGGTGGTT
TTTCGGCCCT TGCGGCGTGC CCAGCCGCTG ATGACGGTCG TGGCGGCGGT CGGCCTCACG
ATCGCGCTGC AGGCCGTCGC CGTGCTCCAG TTCGGATCTG ACAACAGGTT CCTCAGCCCG
GTGCTGCCGC AGTCACCGCT GTCCCTGCTG GGCGTGACCG TGGCGAGTGA CCGGCTGCTG
CTCGCCGCGT CGGTCATCGT GGTCGCCGCC GGTCTGTGGG CGATGTCGCG CTGGACGTTG
TTCGGCCTGG CTACCCGCGC CGTCGCCGAG GATGAGCAGA CCACCGCGCT TCTCGGCCGG
CGGCCCGGCT GGATCGCCGC CGTCAACTGG GTCATGGCGG CCGTGCTCGC CGCCCTCGCC
GGGATCCTCG TGGCGCCGAT CAGTGCGCTG AATCCGACGA GCTACTCGCT GTTCGTCGTT
CCCGCGCTCG CCGCCGCTCT GCTCGGTGGC CTGTCCTCGT TCGGTCTGAC CGTCGTCGGA
GCTCTCGGCC TCGGCATGAC CCAGGCCGTC CTGATCCCGC TGCAACAGGA CGTCTCCTGG
TTGAACCAGC CGGGACTGCG CGCGCTGCTT CCGATGCTTC TGGTCATCGC GGTGGCGGGC
CGGCGCGGGG ATCTCATTCC CGGTCGCGCC GCGGGCGTCG CCGTGTCGGC TCCGATGCCG
GTGGTCGACC CGCCGGAGTC TCCCCTGCGC CACCTCGCGG TCGGTGTGCC GTTCGGGGTG
GTCGCGATCC TCGTGCTGGC CGGCCCCTAC CGGCTCGGCC TCGAACGCAG CCTTGCCGGC
GCCGTGGTGT GTCTGTCGTT CGTCGTGTTG ACCGGGTACG TCGGACAGCT CTCGTTGGCA
CAGATGACCC TCGCCGGTGT CGCCGGCTTC CTGTTGGCCA GACTCCAGGG TGAGCTGGGC
GTGCCGTTCC CGATCGCACC CCTGCTCGCC ACGGGTGCCG CCGCCGTGGC GGGCCTGCTG
CTGGGGGTGC TGTCACGGCG GCTGCGTGGA ATCGACCTGG CATTGATCAC TCTGGTCGCC
GGCGTCGCGA TCCAGGAGGT GGTGTTCGGA AACCCGCTGG TCACCGGCGG GTTGGCCGGG
TCGGTAGTAC CGAGTCCGAA GATCTTCGGC CTCGATCTCG GGCTCGCCGG TGCCGGGTTC
CCCCGGCCGC AGTACGGGCT GCTGGCGTTG GCCGTGCTCG CCGCGTGCTG CTACGGAGTC
GCCCGGCTGC GCACCGCGGA CCTGGGCCGG CGCATGCTGG CCGTGCGCGC GAACGAACGG
GCCGCTGCCG CGGCCGGGAT CGACGTCCGT CGTACGAAGG TGCTCGCCTT CACCCTCTCC
GCCGCGATCG CCGGTCTCGG CGGCTGCCTC ATCGGCTACG GCCAGGGACG TCTGTCCTTC
GACTCGTTCG GCGTCACGGC CTCGCTGTTC TTCCTGGCGA TCGCGGCCGC CGGCGGGGTG
ACGAGTGTCG GCGGAGCGTT GCTGGGCGGT CTGCTGGTGC CGGGCGGAAT CGTGTTCATC
GTGCTGGACC AGGTTGCCGG GCTCGGCAAG TACCAGTCCG TGCTGTGCGG GATCGCCGTC
GTGGTGCTGG CGGTGCTACG TCCGGCCGGG CTCGCGTACC GACCGCATCG GACGGCTCGC
GCCGATCATC AGGGCCGCGC GGATCGGTCG GGTGGCACGC ATCGGACCGG TCCTGGGCAG
CGAACGCGTC GAGGAGATCA CGTGCGACAC CCGCAGCCGC CGGACCAGGG CCGGCCGAGC
CTGACCCCGC ATCCGGTCAA CCCGGGCGGA GCCCCGTGA
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| Protein sequence | MTTYIAALLL GLGPGAVYAA LGLGLVLTYR ASGVVNIAHG AFAMYATYQY AELREVGDLV
LPVVGMPPRI HLTDTPTFGL ALSVSLAMAA ILALASYLVV FRPLRRAQPL MTVVAAVGLT
IALQAVAVLQ FGSDNRFLSP VLPQSPLSLL GVTVASDRLL LAASVIVVAA GLWAMSRWTL
FGLATRAVAE DEQTTALLGR RPGWIAAVNW VMAAVLAALA GILVAPISAL NPTSYSLFVV
PALAAALLGG LSSFGLTVVG ALGLGMTQAV LIPLQQDVSW LNQPGLRALL PMLLVIAVAG
RRGDLIPGRA AGVAVSAPMP VVDPPESPLR HLAVGVPFGV VAILVLAGPY RLGLERSLAG
AVVCLSFVVL TGYVGQLSLA QMTLAGVAGF LLARLQGELG VPFPIAPLLA TGAAAVAGLL
LGVLSRRLRG IDLALITLVA GVAIQEVVFG NPLVTGGLAG SVVPSPKIFG LDLGLAGAGF
PRPQYGLLAL AVLAACCYGV ARLRTADLGR RMLAVRANER AAAAAGIDVR RTKVLAFTLS
AAIAGLGGCL IGYGQGRLSF DSFGVTASLF FLAIAAAGGV TSVGGALLGG LLVPGGIVFI
VLDQVAGLGK YQSVLCGIAV VVLAVLRPAG LAYRPHRTAR ADHQGRADRS GGTHRTGPGQ
RTRRGDHVRH PQPPDQGRPS LTPHPVNPGG AP
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