Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0314 |
Symbol | |
ID | 3903346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 361643 |
End bp | 362797 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877643 |
Product | amidohydrolase 2 |
Protein accession | YP_479430 |
Protein GI | 86739030 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.384708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCGCC CGGTGGAACC GTTCGTAGAT CACGAGCTCG TCGACCATCA CTGCCATGGT CTGGTCGGCC GCGATCTGAC TCGCCCGGAA TTCGAAAGCA TGATCACTGA GGCGGAACAC CCCGGACCAC CGGGGACGAC GCTGTTCGAC AGCCAGATCG GCTTCGCCCT GCGGCGCTGG TGCGCGCCGG TGCTCGACCT GCCGGCGCAT GCCGCGCCGG AAGACTACCT CGAACGCCGG GCGGAGCTTG GCCACGCCGA GGTGCACCGG CGGCTGCTGC GTGCCTGCGG GATCACCACG TTCTGCGTTG ACGCCGGATT CCAACCGGAG CCGCTGACCA GCGCCGCGGA GCTGGCCGAG CTCGCCGGCG GACGCGGCGT GGACGTGGTG CGGTTGGAGC GGGTCGCCGA GCAGGCCGCG GTCGACGTCA TCACCGGGCA GATCGGCATG ACCCACCTCG CCGACACCGT GCGGGCCCGG CTCGAGTCCA CCCGCCCCAC CATGGTCGCG GTGAAGTCGG TCGCGGCCTA CCGCGGCGGC CTGGAGCTGC CCGCACAGCG ACCGACCGAC CGCGAGGTCG CCGCCGCCGC TCGCGGCTGG ATCCACGAGA TCCGCGCCGG CGCCCCGATC CGGCTGACCG ACCCCACCCT GCATGCCTTC CTCATCTGGT GCGGGGTCGA CGCGCGGCTC CCCATCCAGA TCCACGTCGG ATACGGGGAC AGCGACATCG ACCTGCGCCG GGGCAACCCA CTGCTACTCA CCGGCCTGCT GCGGGCGATA GCACCGACCG AGGTCAGTGT GCTGCTGCTG CATTGCTACC CGTTCCACCG GGAGGCTGGC TACCTGGCCC AGGTGTTCCC GAACATCTAC CTTGACCTCG GGCTCGCCAT CCACAACTGC GGCCGCGGCT CGGCCGGCCT GCTCGCGCAG GCACTCGAAC TCGCCCCGTT CGGCAAGTTC CTCTTCTCCA CCGACGCCTT CGCGCTCGGC GAGCTGTACC TGCTCGGGGC CGTCCTGTTC CGGCGTGGGC TGTCGGCGTT CCTCGCGGCG GGCGTCGCCG ACGACGCCTG GACCGCGGCG GACGCCAAGC GGGTCGCCCG GCTCATCTGC GCGGACAACG CCCGCCGCGT CTACAACCTG TACAACCCGC CCTGA
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Protein sequence | MGRPVEPFVD HELVDHHCHG LVGRDLTRPE FESMITEAEH PGPPGTTLFD SQIGFALRRW CAPVLDLPAH AAPEDYLERR AELGHAEVHR RLLRACGITT FCVDAGFQPE PLTSAAELAE LAGGRGVDVV RLERVAEQAA VDVITGQIGM THLADTVRAR LESTRPTMVA VKSVAAYRGG LELPAQRPTD REVAAAARGW IHEIRAGAPI RLTDPTLHAF LIWCGVDARL PIQIHVGYGD SDIDLRRGNP LLLTGLLRAI APTEVSVLLL HCYPFHREAG YLAQVFPNIY LDLGLAIHNC GRGSAGLLAQ ALELAPFGKF LFSTDAFALG ELYLLGAVLF RRGLSAFLAA GVADDAWTAA DAKRVARLIC ADNARRVYNL YNPP
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