Gene Francci3_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0304 
Symbol 
ID3903336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp351427 
End bp351810 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content72% 
IMG OID637877633 
Productputative signal transduction histidine kinase 
Protein accessionYP_479420 
Protein GI86739020 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.750895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGGAC TCGGCCGACT CCCGAGCCTG CTGCGCGAGG TCCGGCTCTG CGGGGTGCCC 
GTCGAGCTCG TCACGCAGGG AGACTCCCAG GATCTCACGG GCCTGCCGGC GGACCTCGAT
CTGGCGGCCT ACCGCATCAT TCAGGAGTCG CTGACCAACG TGCTCCGGCA CGGGGAGCCG
AACGGAGTAC GGGTGCGCGT CACCATGGGG ATCATCGACG GCCGGCTCGT CGTCGACGTC
ACCGACCAGC CGGGCACGGC CGCGGAGCTC GGCGGAAGCC TCACCGCCGG ACCGGTCCGG
GCCGGCGGTT GGCAGGTCCG GGCCGAGCTT CCGGTGCATA CCGGCGGCGG CCGGACGTTC
CCCAGCTGGG TGACCCGCTC GTGA
 
Protein sequence
MTGLGRLPSL LREVRLCGVP VELVTQGDSQ DLTGLPADLD LAAYRIIQES LTNVLRHGEP 
NGVRVRVTMG IIDGRLVVDV TDQPGTAAEL GGSLTAGPVR AGGWQVRAEL PVHTGGGRTF
PSWVTRS