Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0290 |
Symbol | |
ID | 3903034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 336011 |
End bp | 337183 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877619 |
Product | response regulator receiver modulated serine phosphatase |
Protein accession | YP_479406 |
Protein GI | 86739006 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.639758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.494925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCGC CGAACGCTGA TCCCGTAAAA GTGATCTGGC CGGTGCTGTT GGTCGAGGAT GATGATGCCG ACGCCTATCT GGTGTCCGAG CTCCTCGACG AGGTCTCCGC TCCGGTCGAG CTGACCCGGG TGCGCACGGT GGCCGAAGCC GCCCGTCGCA GCGAGCACGT CGCGTGCGTG CTGCTGGATC TCGGGCTGCC GGACAGCGAG GGCCTGTCGG CGCTACGCCG GTTGCTCACG GTCGAGGCGG GAGCGCCGGT CGTGGTGCTC ACCGGTCTGG TTGACGAGTA CCGGGGGGCG CAGGCGGTCG CCGCGGGCGC GCAGGACTAT CTCGTCAAGG GTCAGGTCGA CGGGCGGGAC CTGGTCCGGG CCGTCCGGTA CGCGATTGAG CGCAAGCGGG CCGACACCGC CGCGCAGGCG CTGCGGGAGT CGGAGCTGCT GGCGGACGAG CGGGCCCGCC TCGAACGCGG CCTGTTACCC CGGCCACTCA TCGACGACGG CCGGTTGCAT CACGACGCCC GGTACCGCCC CGGCCGGCAG CAGTCCCTGC TCGGCGGGGA CTTCTACGAC ATGGTGTCCA CCGCGGACGG CACGCTCCAC GTCCTGCTCG GCGACGTCTG CGGGCACGGC CCGGACGAGG CGGCGCTCGG GGTGAGCCTG CGGATCGCGT GGCGCACGTT GGTCCTCGCC GGTGTTCCGG AACCCGACCG GCTCGGGTAT CTCCAACGCG TGCTGGTGAG CGAGCGGGAA CAGGATGAGA TCTTCGCGAC GGTGTGCACC CTCGCGATCG CTCCCGACCG GACCTCGGCG CGGATGCGGC TGGCCGGTCA TCCGCCGCCG GCGCTGTTGC ATCCGCGGCT GTCGGCGCTG CCGGGCGACG TCGTCGGTCC GGCTCTTGGC ATCGTCGACG ACGACCTCTC CGAGGAGGTG CGGATCGAGC TCGGGCCGCA CTGGGCGCTC CTGCTCGCCA CGGACGGCCT GCTGGAGGGG CGGGAGGGAC CGGGCGGGGA ACCGCTGGGC TGGGAGGGCG TGCTGCCCGA GATCGCCAAA CTCTGGCCCG CCGACGACCC CGACGGGCTG CTCGACAACC TGATCGACCG GGTGGAGGCG CGCAATGGCG GCCCGCTGAC CGACGACGTC GCGCTCCTGC TGCTGATCTG GGGTGCCGGC TGA
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Protein sequence | MRAPNADPVK VIWPVLLVED DDADAYLVSE LLDEVSAPVE LTRVRTVAEA ARRSEHVACV LLDLGLPDSE GLSALRRLLT VEAGAPVVVL TGLVDEYRGA QAVAAGAQDY LVKGQVDGRD LVRAVRYAIE RKRADTAAQA LRESELLADE RARLERGLLP RPLIDDGRLH HDARYRPGRQ QSLLGGDFYD MVSTADGTLH VLLGDVCGHG PDEAALGVSL RIAWRTLVLA GVPEPDRLGY LQRVLVSERE QDEIFATVCT LAIAPDRTSA RMRLAGHPPP ALLHPRLSAL PGDVVGPALG IVDDDLSEEV RIELGPHWAL LLATDGLLEG REGPGGEPLG WEGVLPEIAK LWPADDPDGL LDNLIDRVEA RNGGPLTDDV ALLLLIWGAG
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