| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0279 |
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| Symbol | |
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| ID | 3903021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 323798 |
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| End bp | 325183 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877607 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_479395 |
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| Protein GI | 86738995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATCGGT TTGACGCGCA GGCTGCCGAC CTCGTCCGCG CGATATGTGA CTTTGCCCGC
GTCCGGCTCG GATTCGATCC GGTACCGCTG GACGCGCCAT TGTCATGGGA CGAGTTGGCG
GCGGCGGTGG GATCCACGAT CACCGCCGAG GGCATCGGTG GCCGTCGCGC TCTCGAGGTG
TTCGACGAGG AGCTGTCCCG CGCCTGTATC TCGACGGATC ATCCCCGCAA TCTCGCCTTC
ATCCCGGCCG CTCCGACTAA GGCGGCTGTA TTGTTCGATC TGGTGGTCGG GGCGTCGTCC
ATCTACGCGG GCAGCTGGAT GGAGGGCGCG GGCGCGGTCT TCGCGGAGAA CGAGGCGCTG
CGATGGCTGT CGGACCTCGC GGGCTTCCCC GCCTGCGCCG GTGGGCTGTT CGTACCGGGG
GGCACCGTCG GCAACCTGTC GGCGCTGGCC GCCGCCCGGC ATGCCGCCCG GAGCCGGTTG
ACCGCCGCCG GTCGGCCGAC TCCACCGCGA TGGCGGTTCG TCTGTGGGGC CGAAGCGCAC
TCCTCCCTCT ACCAGGCCGC CACGGTGCTC GACACCGAGG TCGTCGTCGT GCCGACGGAT
GACGCCGGAC GACTGACCGG TCCGCTGTTG GCCGAGGCGC TGGACCGGCT CGCCGAGCAG
GACGGCGCCC AGGCCGTCGA CGGCGTGTTC GCGGTGGTGG CGACCGCAGG GACCACCCAG
TTCGGCACCG TCGATGACAT CCGCGGGGTG GTGGACGTCT GTCAGGCCCG CGGGCTGTGG
GTACATGTGG ACGGCGCCTA CGGGCTGGCC GCGCTCGCCG CCGCATCGAC CCACTCTCTC
TTCGACGGGA TCGCCGAGAC CGACTCGTTC ATCGTCGATC CGCACAAGTG GCTGTTCGCG
CCGTTCGATG CCTGCGCGCT GGTGTATCGC GATCCGGCGG TGGCCCGGGC GGCGCACGGC
CCGCAGCGGG CCGGCTACCT CGAGGTCCTG GATTCGGCGG GGGCCTGGAA CCCGTCGGAC
TACGCCATCG GGCTGTCCCG GCGGGCCCGC GGGCTGCCGT TCTGGTTCTC GCTGGCGACG
CATGGCACCT TGGCCTACGG CCGGGCCATC GAGTCCACGC TGGCGACCGC CCGGGCGGCC
GCGCTCCAGA TCGCCGCGCT GCCTTACGTC GAGCTGGTGC GGGAACCGCA GCTGTCGATC
GTGGTGTTCC GTCGGCTGGG TTGGCAGGCC GCGGACTACC AGCGGTGGAG CGAGAACCTG
CTGCGGGACG GTTTCGCGTT TGTTCCGCCC ACCGTGCACG AGGGCGAGAC CGTCGCCCGG
TTCGCCATCG TCAACCCGCG GACCACCGTT GACGACATCG GCGCGATCCT CGCCACGATG
GCCTGA
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| Protein sequence | MHRFDAQAAD LVRAICDFAR VRLGFDPVPL DAPLSWDELA AAVGSTITAE GIGGRRALEV
FDEELSRACI STDHPRNLAF IPAAPTKAAV LFDLVVGASS IYAGSWMEGA GAVFAENEAL
RWLSDLAGFP ACAGGLFVPG GTVGNLSALA AARHAARSRL TAAGRPTPPR WRFVCGAEAH
SSLYQAATVL DTEVVVVPTD DAGRLTGPLL AEALDRLAEQ DGAQAVDGVF AVVATAGTTQ
FGTVDDIRGV VDVCQARGLW VHVDGAYGLA ALAAASTHSL FDGIAETDSF IVDPHKWLFA
PFDACALVYR DPAVARAAHG PQRAGYLEVL DSAGAWNPSD YAIGLSRRAR GLPFWFSLAT
HGTLAYGRAI ESTLATARAA ALQIAALPYV ELVREPQLSI VVFRRLGWQA ADYQRWSENL
LRDGFAFVPP TVHEGETVAR FAIVNPRTTV DDIGAILATM A
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