Gene Francci3_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0246 
Symbol 
ID3903654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp285155 
End bp285424 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content67% 
IMG OID637877574 
ProductRv0623-like transcription factor 
Protein accessionYP_479363 
Protein GI86738963 
COG category[S] Function unknown 
COG ID[COG4423] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACG GAGCCTTGAC GGTGTTGAAC ATCAAAAATG AGGAAGCCCA GCGTCTGAGC 
CGCGAGCTTG CGGAGCTGAC GGGGGAGACC GTCACGACGG CCGTGCTCGT CGCTGTCCGG
GAACGCCTGG AGCGGATGCG CGCCGACCGC GACGAAGGTG AGCAGCGAGC GGCCCGCATC
GTTGCCCTGG GTCGTCAGAC AGCGGCCGCG GTGCCCCCGC CCGGCCTGAG CATCGAGGAT
CTCTACGATG AGCATGGGTT GCCAGCGTGA
 
Protein sequence
MVDGALTVLN IKNEEAQRLS RELAELTGET VTTAVLVAVR ERLERMRADR DEGEQRAARI 
VALGRQTAAA VPPPGLSIED LYDEHGLPA