Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0243 |
Symbol | |
ID | 3903651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 281268 |
End bp | 283220 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877571 |
Product | heat shock protein 90 |
Protein accession | YP_479360 |
Protein GI | 86738960 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACCC GGGTCGAGAC GCTGGAGTTT CAGGCCGAGG CGCGTCAGCT TCTGCAGCTG ATGGTCCATT CGATCTACTC GAACAAGGAC ATCTTCCTGC GGGAGCTGAT CTCTAACGCG TCCGATGCCC TGGACAAGCT GCGCATCGCG TCGTTGGTCA AGGACGGCCC GCGGGTCGAC AGCGCCGACC TGCGCATCGA GATCGAGGCC GACGTCAACG CTCGCACTCT GACCGTCCGC GACAACGGCA TCGGGATGTC CCGCGACGAG GTCGTCGGGC TCATCGGCAC CATCGCGAAG TCCGGCACGG CCGAGCTGCT GCGCAAGCTG CGGGAATCCG AGGACGGCGC GGCGTCATCC GATCTGATCG GGCAGTTCGG CGTCGGCTTC TACTCCACCT TCATGGTGGC CGACAAGGTC ACCCTGCTGA CTGGGAAGGC CGGTGAGAGC GGCGGCACCC GGTGGGAGTC CGACGGCGCG GGCACCTACG TCATCGAGAC GGTGGACGAC GCGCCGCGGG GAACCGCGGT CACGGTCCAC CTGAAGCCCG AGGACAGCGA GGACCGTCTC TACGACTACA CCGACGAGAA CAAGATCCGG GAGATCGTCA AGCGGTACTC CGACTTCATC GCCTGGCCCA TCCGGCTGGT GTCGGCCCCC GCCGCGAAGG ACCGAGACTC GAACGACGAC GGGACAGCCG AGTCCGGCGC CGGCGCCGAG AATGCCGGCG ACCGGCCGCT CAACTCGATG AAGGCGCTGT GGGCCCGGCC GCAGAGCGAG GTCGACAAGG CCGAGTACGA CCAGTTCTAC CAGCACCTCA GCCATGACTG GACCGGCCCG CTCGAGGTCA TCCACATGAA GGGCGAGGGG ACGTTCGAGT ACGAGGCCCT GTTGTTCATC CCGTCGCGAG CGCCGCTCGA CCTGTTCACC CGGGATGCAC GCCGCGGCGT CCAGCTGTAT GTGAAGCGCG TGTTCATCAT GGATGACTGT GCGGAGCTCC TGCCGAACTA TCTGCGCTTC GTCCGGGGCG TCGTCGACAC GCACGACCTG TCGCTCAACA TCTCCCGAGA GATCCTCCAG CAGGACCGCC GGATCCAACT TGTGCGGCGC CGGCTGGTCA AGAAGATACT GGCCTCCATC AGGGCTCTTC AGGAGAACGA CGCCGAGCGC TACCGCACGC TGTGGAAGGA GTTCGGCGCC GCCCTCAAGG AGGGCCTCCT CGAGGATGCC GACAACCAGG ATGCGATCCT CGGCCTCGTC TCGGTGGACT CGACGCACGA CGCCGATCGG CCGACCACGC TGCGCGAGTA CATCGAGCGT ATGAAGGACG CCCAGAACGA GATCTACTAC CTGACCGGCG ATTCGCGCGG AATGATCGAG AACTCGCCGC ACATGGAGGC GTTCCGGGCC AAGGGCTACG AGGTCCTGAT CCTGACCGAC CCGGTTGACG AGGTCTGGGT CGAACGGGTG GCGGAGTTCG ACGGCAAGCC GCTGAAGTCG ATCGCGAAGG GCGAAGTCGA CCTCGACACC GACGACGAGA AGAAGAGCAG CGAGGCCGAG CGGGAACAGC TGCGCAAGGA CTTCGCCGCC CTACTGCCCT GGCTGGCGGC CAAGCTTGAG GACGACGTCA AGGAGGTCCG GCTGTCCAGC CGCCTCACCA CGTCGCCGGC CTGCCTCGTC GGCGACACGT TCGACATGAC GCCCGCGCTG GAGAAGATGT ACCGGGCGAT GGGGCACGAG ATGCCACGCC CCAAGCGCAT CCTCGAACTC AACCCGACGC ACGCGCTGGT CATGGGCCTG CGCGCCGCAC ACGAACGGGA CGCGGATTCC GCCGCCCTCG GCGACACCGC GGAGCTGCTG TACGGCATGG CGCTGCTCGC CGAAGGCGGA GAACTGCGCG ATCCCGCGCG ATTCACCCGC CTCCTCGCCG AACGCCTGGC GGAGGCGCTG TAG
|
Protein sequence | MSTRVETLEF QAEARQLLQL MVHSIYSNKD IFLRELISNA SDALDKLRIA SLVKDGPRVD SADLRIEIEA DVNARTLTVR DNGIGMSRDE VVGLIGTIAK SGTAELLRKL RESEDGAASS DLIGQFGVGF YSTFMVADKV TLLTGKAGES GGTRWESDGA GTYVIETVDD APRGTAVTVH LKPEDSEDRL YDYTDENKIR EIVKRYSDFI AWPIRLVSAP AAKDRDSNDD GTAESGAGAE NAGDRPLNSM KALWARPQSE VDKAEYDQFY QHLSHDWTGP LEVIHMKGEG TFEYEALLFI PSRAPLDLFT RDARRGVQLY VKRVFIMDDC AELLPNYLRF VRGVVDTHDL SLNISREILQ QDRRIQLVRR RLVKKILASI RALQENDAER YRTLWKEFGA ALKEGLLEDA DNQDAILGLV SVDSTHDADR PTTLREYIER MKDAQNEIYY LTGDSRGMIE NSPHMEAFRA KGYEVLILTD PVDEVWVERV AEFDGKPLKS IAKGEVDLDT DDEKKSSEAE REQLRKDFAA LLPWLAAKLE DDVKEVRLSS RLTTSPACLV GDTFDMTPAL EKMYRAMGHE MPRPKRILEL NPTHALVMGL RAAHERDADS AALGDTAELL YGMALLAEGG ELRDPARFTR LLAERLAEAL
|
| |