Gene Francci3_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0215 
Symbol 
ID3905382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp251852 
End bp252877 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID637877544 
Productmethane/phenol/toluene hydroxylase 
Protein accessionYP_479333 
Protein GI86738933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.248758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CCCCCACGGC GAGGCCTCTG CGCACCTGGA GTGTGTTCGA CGGGGCCCGC 
CGCAAGCCCA ACGAGTACGA GACCGTCACC GGCCACTTCC ACTACCACTT CGGGCGGCAG
CCGGCCCCGT TCGACCTTGA TCCCAACAGT CCGATCAACC GGTGGTACCT GCGCTACCGC
GAGGGCTCGC CGCTGCGGGG CGTGGACTGG GAGGAGTTCC GCGACCCCGC CCAGCTCAAC
TACCGCCGCT ACATCGCCCT GCAGCACGAC CGGGAGATCT ACGCCGAAGG TGTCGTCGAC
CACTTCGAGG CCCTCGATGC GGATGCCGGC CTGGACCCGG TCTGGGTGGG CGTCCTCGCG
CGGCTTTACC TGCCCGCCCG CTACCTGTTC CACGTGCTGC AGATCACCAG CCTGTACGTC
GGCCAACTCG GACCCAGCGC CTACGTCAGC AACGCCGCGT TCTTCCAGGC CGCCGACGAA
CTGCGCGCTC TGCAGTGGAT CGCCTACCGG GCCAAGGCGC TGTCGTTGGT CCACGGCGCC
GACCTCGCCG ACAGCCGGGT CACCCGACGG TTCTGGGAAG ACGACCCGGC CTGGCAACCC
GCCCGAGAGG CGCTGGAGCG GTTGCTGGTC GCCTACGACT GGGCGGAGGC CTTCACGGCA
CTGAACCTCG TCGTCAAGCC GGCGCTCGAC ACCCTGCTCA AGACCGCCCT CGCCGATCTC
GCGGACGCCA ACGGCGACGG CCTGACCGCC CAGCTGCTGC GCGAGTCCGG CGTCGACGGC
GCCCGCAGCC GGGCGTGGAG CGCGGCCCTG GCCCGCCACG CCATCGCCGG ACGCCCCGAC
AACGCCGCGG TTCTCGCCGC CTGGGAAGAA AACTGGCGCC CCCGCGCGGA GAAGGCCGTC
GCGGGCTTGG CGGCCCTGTT CGACAATGCC CCGAACCCGG CCAGCCCGGC CGAGGTCGCC
ACCACCGTCG CCGCGACCAC CGCGGCGTTC CGTGCCTCCT GGACCGGCAC GGCGGATCCT
GCCTGA
 
Protein sequence
MTTSPTARPL RTWSVFDGAR RKPNEYETVT GHFHYHFGRQ PAPFDLDPNS PINRWYLRYR 
EGSPLRGVDW EEFRDPAQLN YRRYIALQHD REIYAEGVVD HFEALDADAG LDPVWVGVLA
RLYLPARYLF HVLQITSLYV GQLGPSAYVS NAAFFQAADE LRALQWIAYR AKALSLVHGA
DLADSRVTRR FWEDDPAWQP AREALERLLV AYDWAEAFTA LNLVVKPALD TLLKTALADL
ADANGDGLTA QLLRESGVDG ARSRAWSAAL ARHAIAGRPD NAAVLAAWEE NWRPRAEKAV
AGLAALFDNA PNPASPAEVA TTVAATTAAF RASWTGTADP A