| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0211 |
|---|
| Symbol | |
|---|
| ID | 3905378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 249173 |
|---|
| End bp | 250768 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637877540 |
|---|
| Product | methane/phenol/toluene hydroxylase |
|---|
| Protein accession | YP_479329 |
|---|
| Protein GI | 86738929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.163709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGCG GGAGCGTCGC CGGACCGGGC GGGTTCGGTC CGCGTCCGTG GGGGAACACC
AAGGAGGCGA GCATGCCGAA GCTTGCCCGC AGTGACTGGT ACGACCTTGC CCGCGACACC
AACTGGTCGT TTGGCTATGT GTCCGAGCAG GACGTCTTCC CAGAGGAGCT GTCGGGGACG
GGCCGGGTCC CAGCCGAGGG GTGGCTGGCC TGGGACGAGC CATACAAGAT CACTTATCGG
GAGTACGTGC ACAACCAGGT GACGAAGGAC ACCACGACGT ACTCGGTCAA GAACGCGATC
GCCCGCTCGG CGCTGTTCGA GAAGCTCGAC CCGGGATGGA AGTCGGTGAT CCTGGCGCAC
TACGGCGCGA TCACGATGCC GGAGTACCTC GCCTCCATCG GTGAGGCGCG GATGGGCCGG
TTCGGGCGGG CGGCGGCGTG GCGCAATACG GCGACGTTCG GCACGCTCGA CGAGGTCCGG
CACGGCCAGA TCCAGGCGTT CTTCCCCTAT GGGTTGATCG GGAAGGAGCC GCGGGCCGAC
TGGGCGCTCA AGGCGTTCCA CACGAACGAC TGGATCGTGC TCGCGGTCCG GCAGCTGTTC
GACGACATGT TCGTCGCCAA CGACGCGCTG TCGATCGCGC TGCAGCTCAC CTTCACCCTT
GAGACCGGTT TCACGAACCT GCAGTTCCTC GGCATGGCGG CCGACGCGAT CAAGGTGGGC
GACCTGGAGT TCGGATCGCT GATCTCCAGT ATCCAGACGG ACGAGGCCCG CCATGCCCAG
CAGGGCGAGC CGACCATCAA GATCCTTGCC GAGGGCGGCC ACAAGGACTG GGGCCAGTTC
CTCATCGATC ACATGTTCTG GCGGTCATGG CGGGTGTTCG CGCTGCTGAC CGGCCTGTCG
ATGGACTACT ACACCCCGCT CGAGCATCGG ACGATGTCGT TCAAGGAATT CATCGAAGAG
TGGGTGATCA AGCAGTTCTC CGACCAGTTC CGGGACTTTG GCCTGGAGTA TCCGTGGTAC
TGGGAGGAGT TCGTCAACGA ACTCACCTGG TACCACCACG CGATTCACCT CGGGGTGTGG
AACTGGCGGC CGACGGTCTG GTGGAACCCG GACGCCGGCG TCTCGGCGGA CGAGCGGGTG
TGGCTGGAGG AGAAGTACCC GGGCTGGAAC CGCACGTTCG GCAAGTACTG GGATGCCATC
GGCGACAACA TCCGCGCGGG GAAGGTCGAG GCCACCTTCC CGGAGACGCT GCCGTTGGTG
TGCAATCTGT GCCAGCTGCC GATCGTGCGG GCCGCCGGCG TGGAGGCCGG CGCGCTGGCC
TCGGCCGCTC CGCTGCGCCA CACCCACGGG GGCCGTGACT ACCTGTTCTG CTCGGAACCC
TGCAAGTGGA TCTTCGCGCG GCGTCCGGAG CGGTTCGCCG GGCACCGGTC GCTGGTGGAC
CGGTTCCTCG CCGGCGAGAT CAGCCCGCCC GACCTCGGCG GCGTGCTCGC CTACATGGGG
CTGTCGCCGG CCGAGCAGGG ACAGGATGCC ACCGGCTACG CCTGGGCGCA GGCCGCGGCG
GCGGGCGCAA CCGGCGCCAG GGCGGCACGG CGATGA
|
|---|
| Protein sequence | MRRGSVAGPG GFGPRPWGNT KEASMPKLAR SDWYDLARDT NWSFGYVSEQ DVFPEELSGT
GRVPAEGWLA WDEPYKITYR EYVHNQVTKD TTTYSVKNAI ARSALFEKLD PGWKSVILAH
YGAITMPEYL ASIGEARMGR FGRAAAWRNT ATFGTLDEVR HGQIQAFFPY GLIGKEPRAD
WALKAFHTND WIVLAVRQLF DDMFVANDAL SIALQLTFTL ETGFTNLQFL GMAADAIKVG
DLEFGSLISS IQTDEARHAQ QGEPTIKILA EGGHKDWGQF LIDHMFWRSW RVFALLTGLS
MDYYTPLEHR TMSFKEFIEE WVIKQFSDQF RDFGLEYPWY WEEFVNELTW YHHAIHLGVW
NWRPTVWWNP DAGVSADERV WLEEKYPGWN RTFGKYWDAI GDNIRAGKVE ATFPETLPLV
CNLCQLPIVR AAGVEAGALA SAAPLRHTHG GRDYLFCSEP CKWIFARRPE RFAGHRSLVD
RFLAGEISPP DLGGVLAYMG LSPAEQGQDA TGYAWAQAAA AGATGARAAR R
|
|---|
| |