Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0169 |
Symbol | |
ID | 3903138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 199276 |
End bp | 200727 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637877501 |
Product | kelch repeat-containing protein |
Protein accession | YP_479290 |
Protein GI | 86738890 |
COG category | [S] Function unknown |
COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGT CCCGTACATC ACGTCGGTGC GCCTCGCGCG CCTTCGTCCT GACCGCCACG CTGGCAGCAG CCCTGGCCGC GCCGGGGCTG CTCAGCTCGG TGGCCGAGGC GGCAGCACCG ACCGGCAGCC CGACGAGCAG ATGCCCGTCG CTGCCCCAGA TCGCCGGCCC ACTGCAAAGC TGGGAGACGG TTACCGCCCT GCCGACTCCC CGTGTCCATC TCGCGGCCAC CACGGGATGT GACGGACGAA TCTATGCGAT CGGCGGCCAG GCCGCCGAGA CGGGCGCCGG TGGCGGCGCC CCGGGCTCGC CTACGGGGAC GCCCACGGCA ACGCCCGGCC CGACCGCGTC ACCGACTACA CCCACTTCAC CAACCACCAC ACCCACTTCG CCAACCGCAC CCGCATCACC GACGCAGTCG CCGGCCCCCA CCGGGACGCC CGGAAGTTCC GCGACGACGA CATCGACGGT GGGTCCGGCG AGCCTGACCC GGAAGCCACT GGCCGGTCCG CTCGGCCCGT CAACCGATGA CCCGACCACC AGCCCGACCA CCGACCTGCC CACCGCGACG TTGACCGGAT CACCCGGCGC GAGTCCGACC GGTTCACCGA CCACGCCCGG GACACCGACG GGCACCGGCT CACCCACGTC ACCGCCGGGC GTCGCACCCC TGACGCCGGT GGGGACGGTC CAGGTCTACG ACCCGCGGAA GAACGCCTGG ACGGACGCGC CCGATCTGCC GACCGCGCGT ACCCACCTCG CCGCCGCGAC CGACCTCGAT GGCCGGATCT ACGCGATCGG CGGCCGGTCC GGCAGCTCGA ACCAGCCCAC GGACATCGTC GAGGTGTACA CCCCGTCCAG CGGAAGCTGG TCGACGGGGA AGCCCCTGCC GAGCGCCATG GGTGACCCGA GCGCGGCCCG CGGCACCGAC GGCAGGATCT ACGTTCTCGA CGCGAAGACC CTGGCGATCT ACGACCCCGG CTCGGACAGC TGGTCGACGG CCGGGGCGCC GCCATCCGGG AACAGGGCTC CGGTCCTGAC GGCCCTGCCG GACGGCCGGA TCCTGGCCGC CGGCGGCATC GGGGCTGGCG GCGGCTCCGC AGCGCGGGCA GCCACCGACG TCTTCGCCTA TACACCGGGT TCGAAAGCGG CCGAGAAGGG TTCGTGGGCC CAGATGTCCG ACCTGCCGGA CGGCGTCGCG GGTGCCGCCG GGGCGACCGG CCCCGACGGC CGGGTCTACA TCATCGGCGG GCGGGACAGC GCCGGGAACG TCACCGGGGC GGTGCAGGTA TACACCCCGA AGGACGACCG GTGGGCCGCC GGACCGACCA GCTCCCCCTC GACCCGGGCC GGGCATGCCG CGGCGACCGG TGGTGACGGC CGGGTGTACG TGCTGGGTGG AACGTCCAGC TCCGGCAAGA CGCTGAACAC CGTCGCCGCA CTAAGCAAAT AG
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Protein sequence | MNWSRTSRRC ASRAFVLTAT LAAALAAPGL LSSVAEAAAP TGSPTSRCPS LPQIAGPLQS WETVTALPTP RVHLAATTGC DGRIYAIGGQ AAETGAGGGA PGSPTGTPTA TPGPTASPTT PTSPTTTPTS PTAPASPTQS PAPTGTPGSS ATTTSTVGPA SLTRKPLAGP LGPSTDDPTT SPTTDLPTAT LTGSPGASPT GSPTTPGTPT GTGSPTSPPG VAPLTPVGTV QVYDPRKNAW TDAPDLPTAR THLAAATDLD GRIYAIGGRS GSSNQPTDIV EVYTPSSGSW STGKPLPSAM GDPSAARGTD GRIYVLDAKT LAIYDPGSDS WSTAGAPPSG NRAPVLTALP DGRILAAGGI GAGGGSAARA ATDVFAYTPG SKAAEKGSWA QMSDLPDGVA GAAGATGPDG RVYIIGGRDS AGNVTGAVQV YTPKDDRWAA GPTSSPSTRA GHAAATGGDG RVYVLGGTSS SGKTLNTVAA LSK
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