| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0141 |
|---|
| Symbol | |
|---|
| ID | 3903418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 169565 |
|---|
| End bp | 170038 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637877475 |
|---|
| Product | PilT protein-like |
|---|
| Protein accession | YP_479264 |
|---|
| Protein GI | 86738864 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATGA CCAGTGAGCC CGTCCGGCAG GGCCTGCTGG ATACCAACAT CCTGATCCTG
CGCCGCTGGG TGAACGTGGC CGAGCTTCCG GACGAGATGG CGATCAGCGT GGTGACGCTG
GCGGAGCTGT CCGCCGGGCC ACACCAGGTG CGGCGTAACG ACGAGCAGGA CCTGTACGAC
GAGCATGAGG AACGGGCACG GCGGATGGAG ATCCTCCAAC GTGCCGAGAA CGAGTTCGAT
CCGATCCCGT TCGACGCCGA GGCGGCGCGG GTCTACGGCC GGCTGACCGC GGCCGTCGTC
GCCGCGGGCC GCAAACCGCG CCGCCGGACC GCGGACCTGA TGATCGCCGC CACGGCGGTC
GCGGAGGACC TTCCACTGTT CACCACCAAC CCCGGCGACT ACACCGGCCT GGAACGGCTC
CTACGCACGG TCCCCGTCAC GAGGCCGCCA TTGCCCCACG AGAGGAAGCC CTAA
|
|---|
| Protein sequence | MPMTSEPVRQ GLLDTNILIL RRWVNVAELP DEMAISVVTL AELSAGPHQV RRNDEQDLYD
EHEERARRME ILQRAENEFD PIPFDAEAAR VYGRLTAAVV AAGRKPRRRT ADLMIAATAV
AEDLPLFTTN PGDYTGLERL LRTVPVTRPP LPHERKP
|
|---|
| |