Gene Francci3_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0117 
Symbol 
ID3903447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp143542 
End bp144165 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID637877450 
ProductIS630 family transposase 
Protein accessionYP_479240 
Protein GI86738840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.621068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGCC GAGACCTGGG CGAAGGTACG AGGCTAGCGG CGACGACCGG CGCGTGGATC 
GTCTTCGAGG ACGAAGCCGG GCAGAGCCTG CGACCCCCGA AGGCCCGGAC CTGGGCCCCA
CGGGGACACA CCCCGACCGT GCGAGTGTCC GGGAAGGGCT CCGGGCGGGT CTCGATGGCA
GCCCTGGTCT GCTACCGGCC CGGCCAGCGG CCCCGGCTGT TCTACCGGGT CCTGACCCAC
CACGGCCGTA AGGGCGAGCG TCGTAGCTTC TCCGAGGACG ACTACGCCAC CCTGCTCGTC
GCCGCGCACC ACCAGCCCCG TGCTCCGATC ATCCTGTGTT GGGACAACCT CAACACCCAC
CGCAGCGCCG CGATGCGCAG GTTCCTCACC CGCCACGCCC ACTGGCTGAC CGTGATCCCC
CTGCCCGCCT ACGCCCCCGA CCTCAACCCC GTCGAAGGCG TGTGGGCCCA CGTCAAACGC
GACCTGGGCA ACCACGTCCG GGTCACCGTC GACCAGCTCA CCGCCACGAT CAAGACCCTG
CTCAAACGCG TCCAGTACCG GCCCGACCTG ATCGCCGGCT TCCTCGGCCA GACCGAACTG
ATCATCGACC CGGAACCGCC GTAG
 
Protein sequence
MAGRDLGEGT RLAATTGAWI VFEDEAGQSL RPPKARTWAP RGHTPTVRVS GKGSGRVSMA 
ALVCYRPGQR PRLFYRVLTH HGRKGERRSF SEDDYATLLV AAHHQPRAPI ILCWDNLNTH
RSAAMRRFLT RHAHWLTVIP LPAYAPDLNP VEGVWAHVKR DLGNHVRVTV DQLTATIKTL
LKRVQYRPDL IAGFLGQTEL IIDPEPP