| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_4021 |
|---|
| Symbol | |
|---|
| ID | 3888945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 4631487 |
|---|
| End bp | 4632794 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637865579 |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_467222 |
|---|
| Protein GI | 86160437 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.925576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGT GCCCCGGCAT GCCCGAGACC GCGACGTCCC GCTTCCCGCC CTCCATCAAG
TTCCTCGCCT GGAACGAGGC CGCCGAGCGG TTCTCGTACT ACGGGATGGC GTCGATCCTG
GTGCTGCACA TGGTGCGGAA CCTGGGCTTC GCCGAGAACG AGGCGGTCAC CGCGTACCAG
GTGTTCACGG GCGCCGTGTA CCTCATGCCC ATCTTCGGCG CGCTGCTCGC CGACCGCTAC
TGGGGCCGGT ACAACACCAT CCTGTGGCTG TCGCTCGGGT ACGTCGCCGG GCACGCGGTG
CTGGCGGTCT GGGAGAGCGC CTGGGGGCTG CTGGTCGGCC TCTCGCTCAT CTCCCTCGGC
GCGGGCGGCC TGAAGCCCTG CGCCTCCGCG TTCGCGGGCG ACCAGATCCC CGCCGAGGAC
AAGGGGCTGC TCGCGCGGCT CTACGACCTC TACTACTGGA TGATCAACCT CGGCTCGACC
GTCTCGACGC TCGTCATCCC GCTGCTGCTC GACCACGTGA GCGCGCGCGT CGCGTTCGGC
GTCCCGGGCG TCGCGATGGC GGTGGCGCTG CTGGTGTTCT GGGTGGGGCG CGGCCGCTAC
GTGCACGTGC CGCCCGCGCG CCACGCCCCG CCGGCGGCCG CCGGCCCGGG CGGCTCGGCC
GCCGGCGCGG TGCTGCGCAT CCTGGCGGTG TTCGCGCCGG TGACGGTGTT CTGGGCGCTG
TTCTTCCAGT ACGGCTCCTC CTGGACGCTG CAGGCCGAGC GGATGGACCG GCACCTGTTC
GGCTTCCAGA TCGCCGCCGG CAACGTCCAG ACGCTCGACG CCGCCATGGT GCTCACGTTC
ATCCCGGTGT TCGCGGTCTG GGTGTTCCCG GCGCTGGAGC GGCGCGGGGT GAGGGTGACC
GCGCTGCGCA AGATGGCGGT GGGGATGTTC GTGACGGTGC TGTCGTTCGT CGCGGCGGGC
GCGGTGGAGT CCGCGCTGCA GGGCGGGGCG ACGCTGCACG TCGCCTGGCA GATCCCGCAG
TACGTGTTCC TGGTGATCGG CGAGGTGCTG GTGTCCGTCA CCGCGCTCGA GTTCGCGTTC
TCGCAGGCGC CGAAGCACCT GCGCAGCGTG GTGATGGGGC TCTGGTACGT GACCATCTCG
GCCGGCTCGC TGCTCACCGC GCTGGTGGCG TGGCTGAACC GGTTCCAGGG CGTCGCGTAC
TACGCGTTCT TCGCGGCGAT GATGCTCGTC GCCGCGTTCG TGTTCGCCGC GGTGGCGCGC
TGGTACCGGC CGGTGGAGGC GGCGCCCTCG GCGGAGGCCG CGGCGTAG
|
|---|
| Protein sequence | MAECPGMPET ATSRFPPSIK FLAWNEAAER FSYYGMASIL VLHMVRNLGF AENEAVTAYQ
VFTGAVYLMP IFGALLADRY WGRYNTILWL SLGYVAGHAV LAVWESAWGL LVGLSLISLG
AGGLKPCASA FAGDQIPAED KGLLARLYDL YYWMINLGST VSTLVIPLLL DHVSARVAFG
VPGVAMAVAL LVFWVGRGRY VHVPPARHAP PAAAGPGGSA AGAVLRILAV FAPVTVFWAL
FFQYGSSWTL QAERMDRHLF GFQIAAGNVQ TLDAAMVLTF IPVFAVWVFP ALERRGVRVT
ALRKMAVGMF VTVLSFVAAG AVESALQGGA TLHVAWQIPQ YVFLVIGEVL VSVTALEFAF
SQAPKHLRSV VMGLWYVTIS AGSLLTALVA WLNRFQGVAY YAFFAAMMLV AAFVFAAVAR
WYRPVEAAPS AEAAA
|
|---|
| |