| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3790 |
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| Symbol | |
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| ID | 3888287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | + |
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| Start bp | 4344081 |
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| End bp | 4345139 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637865347 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_466993 |
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| Protein GI | 86160208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.315896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCG GCCCCTACCA GTTCCCCGGT CGCTACTTCC TCGCCCCGCT GGCCGGCGTG
TCGGATCGCC CGTTCCGCGC CATCTGCCGG CGCATGGGCG CGAGCTTCGC GTACACCGAG
ATGGTCTCGG CGCACGGGCT GATGCACGGC GCGCTGCAGA CGTCGAGCTA CCTCGACCGC
GAGCCGGACG AGGACCCGTT CGCGGTGCAG ATCTTCGCCT CGGAGCCGGA CGTCCTCGCG
CGCGGCGCGG TGGTCGCGGT CCAGGCCGGC GCCGGCATGA TCGACGTCAA CATGGCCTGC
CCGGTGAAGA AGGTCTGCGG CAGCGGCGCC GGCGCGGCCA TGGGGCGCGA CCCGCGCAAG
GTCGAGGAGG CGGTCCGCGC CATCCGCGCC GCCGTCCCGG TGCCGGTCAC GGTGAAGATC
CGCGCCGGCT GGGACGAGGG CGAGGTGAAC TGCGTGGACG TCGCGCGCGC GGCCGAGGCC
GGCGGCGCGG CCGCGGTGGC GCTGCACGGG CGCACCCGCA GCCAGCTCTA CTCCGGCAAG
GCGCGCTGGG AGCTGGTGCG CGCGGTGAAG CAGGCGGTGG CGATCCCGGT GCTCGGCTCG
GGCGACGTGT GGACCGCCGG CGACGCGGTG CGCATGCGCG AGGAGACCGG TTGCGACGCG
GTGCTGGTGG CGCGCGGCGC CTGCGGGAAC CCGTGGATCT TCCGCGAGCT GAAGGCCATC
GAGGCCGGCC GCCCGCCGCC GCCGCCGCCC GGCCGCGACG AGTGGGTGGG CACCGTGCTC
GAGCACGTGC GCCTGCAGGT GGAGCACCGG GCCCGCATGG CGCCGGGCGA GCCCGCCGAG
GCCTCCGAGC GCCACGCGAT CCGCGAGCTG CGCAAGCACC TGCTCTGGTA CACGCGGGGC
CGGCGCGGCG GCGTGCACTT CCGCCGCGAC GCCGCCGCGC TGGTGACCGC GGCCGACGTG
GCGACGCTGC TCGAGCGCCA CTTCCCGCCG GGTCCGGCGG GCGGCGCCAG CTTCGAGCTC
GACCCGGGCT ACCGCGCCTC GGACGAGGAC GGCGAGTGA
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| Protein sequence | MQIGPYQFPG RYFLAPLAGV SDRPFRAICR RMGASFAYTE MVSAHGLMHG ALQTSSYLDR
EPDEDPFAVQ IFASEPDVLA RGAVVAVQAG AGMIDVNMAC PVKKVCGSGA GAAMGRDPRK
VEEAVRAIRA AVPVPVTVKI RAGWDEGEVN CVDVARAAEA GGAAAVALHG RTRSQLYSGK
ARWELVRAVK QAVAIPVLGS GDVWTAGDAV RMREETGCDA VLVARGACGN PWIFRELKAI
EAGRPPPPPP GRDEWVGTVL EHVRLQVEHR ARMAPGEPAE ASERHAIREL RKHLLWYTRG
RRGGVHFRRD AAALVTAADV ATLLERHFPP GPAGGASFEL DPGYRASDED GE
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