Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_2112 |
Symbol | |
ID | 3889560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 2385292 |
End bp | 2386917 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637863650 |
Product | peptide chain release factor 3 |
Protein accession | YP_465319 |
Protein GI | 86158534 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCACC ACGAGATCTC GCGCCGGCGC ACCTTCGCCA TCATCGCCCA CCCGGACGCC GGCAAGACCA CGCTCACCGA GAAGCTGCTG CTCTACGGCG GCGTGATCCA GCTCGCCGGC GCGGTGAAGG CGAAGCGCGG CCGCGCCAAC GCGGTGTCGG ACTGGATGGA GATGGAGCGC GAGCGCGGCA TCTCCATCAC CACCAGCGTC CTGCAGTTCC CCTACCGCGG GCTGCAGATG AACCTGCTCG ACACCCCCGG CCACGCCGAC TTCAGCGAGG ACACCTACCG CACGCTGCAC GCGGTGGACG GGGCGGTGAT GCTGCTCGAC TGCGCCAAGG GCGTCGAGTC GCAGACCCGC AAGCTGTTCC GCGTCTGCCG CCAGCGCTCC ATCCCCATCT TCACGTTCGT GAACAAGATG GACCGGCCGG GCCGCGACGC GTTCGAGCTC ATCGGCGAGG TGGAGAGCGT CCTCGGCATC GGCGTCTACC CCATCACCTG GCCGGTGTTC CGCAGCGGCG TGTTCCGCGG CGTGTACCAC CGCATGGCGC GGCGCGTGTA CCTGTTCGAC GCCGACCACG CCAACTCCAG CTCCACCACC GGCGCCGAGC GGCCGCCGGT GGAGGTGACC GGCATCGACG ACCCGATGCT GCGCGAGGCG CTCGACGACG CCGGCTACGA TCGCCTCCGC GCCGAGGCCG ACCTGCTCGA CGCGGCCGGC GACGGGTTCG ACCGCGCGCG CTTCGAGGCG GGCGAGCTGT CGCCCATGTT CTTCGGCAGC GCGGTGAACA ACTTCGGCCT GGAGGCGTTC CTCGAGACGT TCAGCGAGCT GATGCCGCCG CCGCGCCCCC GCGACACCGA CCAGGGCCCG GTGGAGCCGA CCCGCGACGA GTTCAGCGGG TTCGTGTTCA AGATCCAGGC GAACATGGAC AAGGCGCACC GCGACCGCGT CGCGTTCGTG CGCATCTGCT CGGGCCGGAT GGTCCGCGGG ATGAAGGCGC ACCACGTCCG CAGCGGCAAG GACGTCCGGC TCGCCAACCC GACGCAGTTC CTGGCTCGCG ACCGGAACGT GGTGGACGAG TCCTGGGCCG GCGACGTGGT GGGCATCCAC GACCCCGGCA ACCTCGAGAT CGGCGACACG CTCACCGGCG GCTCGCGCTT CGTGTACGAG GGCATCCCCA GCTTCGCGCC CGAGCACTTC CGGCGGCTCG CGCTCGTCGA TCCCATGCGC CGCAAGCAGT TCGCGACCGG CCTCGAGCAG CTCGCGCAGG AGGGCACGGT GCAGCTCTAC CGCCCGCCGG CGGGCCGCGC CGGCGACCTC GTGCTCGGCG CGCTCGGCCA GCTCCAGTTC GAGGTGGTGC GCTACCGGCT CGAGTCCGAG TACTCGGTGC AGGTGCGGGT CGAGCCGGTG CCGTACCAGC TCGCGCGCTG GGTGTCGCGC GCCGACGGCA AGCCGCTCGA CCTCGACGCG CTCCACGACG CGGTCGAGGG CATGGTGGTG CTCGACGTGC GCGAGCGCCC GGTGGTGCTG TTCGACCGTG AGTGGGCGCT CCGCACCGCG GAGCGGCTCC ACCCCGAGTA CCGGTTCGCC GAGACCGCCA CCGGCGTGGT CGTCCGCGCG GCCTAG
|
Protein sequence | MSHHEISRRR TFAIIAHPDA GKTTLTEKLL LYGGVIQLAG AVKAKRGRAN AVSDWMEMER ERGISITTSV LQFPYRGLQM NLLDTPGHAD FSEDTYRTLH AVDGAVMLLD CAKGVESQTR KLFRVCRQRS IPIFTFVNKM DRPGRDAFEL IGEVESVLGI GVYPITWPVF RSGVFRGVYH RMARRVYLFD ADHANSSSTT GAERPPVEVT GIDDPMLREA LDDAGYDRLR AEADLLDAAG DGFDRARFEA GELSPMFFGS AVNNFGLEAF LETFSELMPP PRPRDTDQGP VEPTRDEFSG FVFKIQANMD KAHRDRVAFV RICSGRMVRG MKAHHVRSGK DVRLANPTQF LARDRNVVDE SWAGDVVGIH DPGNLEIGDT LTGGSRFVYE GIPSFAPEHF RRLALVDPMR RKQFATGLEQ LAQEGTVQLY RPPAGRAGDL VLGALGQLQF EVVRYRLESE YSVQVRVEPV PYQLARWVSR ADGKPLDLDA LHDAVEGMVV LDVRERPVVL FDREWALRTA ERLHPEYRFA ETATGVVVRA A
|
| |