Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1520 |
Symbol | rpsA |
ID | 3887930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1745301 |
End bp | 1747007 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637863049 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_464730 |
Protein GI | 86157945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.446628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATC AGACTCCCCG CACGCCCGAC GTCGAGACCG AGGACTTCGC GACGCTCTTC GCCGCGAGCG AAGCCAGCGC CGGTCCGATC GAGGAGGGCA AGGTCGTCAA CGGCACCGTG ATCCAGCTGA CCAAGGACTA CGCCGTCATC GACATCGGCT ACAAGTCCGA AGGCCAGGTG CCCATCTCCG AGTTCTCGAC CGCCCCCGGC GGCGAGCCCG CGGTGAAGGT GGGCGACAAG GTCGAGGTGC TCGTCGAGTC CCGGGAGAAC GACACCGGGA TGGTCGTCCT CTCCAAGGAG AAGGCCGACA AGATGCGCAT CTGGGACGAG ATCTCCGCCG CGTGCGAGCG CGACGAGCTC GTCGAGGGCG TGATCGTCGG GCGCGTGAAG GGCGGCCTCT CCGTCGACAT CGGCGTGAAG GCGTTCCTCC CCGGCTCCCA GGTGGACATC CGGCCGGTCC GGAACCTGGA CAAGCTGATC GGCGAGAAGT TCAAGTTCAA GGTCATCAAG TTCAACAAGA AGCGCGGGAA CATCGTGCTG TCGCGCCGGG TCCTCCTCGA GAAGGAGCGC GAGGAGCTGA AGAAGGAGAC CCTGAAGAAC CTGAAGGAGG GCGCGATCCT CAAGGGCGTG GTCAAGAACC TCACCGACTA CGGCGCCTTC ATCGACCTGG GCGGCATCGA CGGCCTGCTG CACGTCACCG ACATGAGCTG GGGCCGCATC GGCCACCCGT CGGAGATGTT CGAGGTCGGC CAGGAGGTCC GCGTCGTCGT CCTGAAGTTC GACCCGACCT CCGAGCGCGT CAGCCTGGGC CTGAAGCAGA TCCAGGAGGA CCCGTGGCAC CGCGCCGACG AGAAGTATCC GGTCGGCACG CGCGTCAAGG GCAAGGTGGT CTCGCTCACC GACTACGGCG CGTTCATCGA GCTGGAGCAG GGCGTCGAGG GCCTCGTCCA CGTCTCCGAG ATGAGCTGGA CGAAGCGCGT GAAGCACCCC TCGAAGCTGG TCAACGTGGG CGATCAGGTC GAGGCGGTGG TGCTCGACAT CGACCCGAAG GCCAAGCGGA TCAGCCTCGG CATGAAGCAG ATCGAGGCGA ACCCCTGGAC GCTGCTCGAG GACAAGTATC CGATCGGCAC GACGATCCGC GGCGAGGTCC GCAACGTCAC CGACTTCGGC ATCTTCGTCG GCGTCGAGGA GGGCATCGAC GGCCTGGTGC ACGTCTCCGA CATCTCCTGG ACCGAGCGCA TCAAGCACCC GGGCGAGAAG TTCAAGAAGG GTGACGTGGT CGAGGCGGTG GTGCTCAACA TCGACGTCGA GAACGAGCGC TTCAGCCTCG GCATCAAGCA GGCGCACGTC GATCCGTGGA CCACGCTCTC CGAGCGTCAC CCGGTGGGCG CCCGCGTGAA GGGCCGCGTC ACCAAGGTCA CCGACTTCGG CGCGTTCGTG GAGATCGAGC CGGGCATCGA GGGCCTGGTG CACGTGTCCG AGATGAAGGA CGAGCGCGTG GAGAACCCGC GCGACGTGGT GCAGGAGGGC CAGGAGGTCG AGGTCAAGGT CATCGACATG GACCTCCAGG ACCGCAAGGT CGCGCTCTCC ATGAAGGCGG TCAACCGCGA CGGCGGCGAG GACGACTACC GCGAGTACCT GCGCCGCCAG GGCGACGGCC GCGCCCGCCT CGGCGACCTG ATGGAGAAGT TCAACCGCCG GAAGTAG
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Protein sequence | MENQTPRTPD VETEDFATLF AASEASAGPI EEGKVVNGTV IQLTKDYAVI DIGYKSEGQV PISEFSTAPG GEPAVKVGDK VEVLVESREN DTGMVVLSKE KADKMRIWDE ISAACERDEL VEGVIVGRVK GGLSVDIGVK AFLPGSQVDI RPVRNLDKLI GEKFKFKVIK FNKKRGNIVL SRRVLLEKER EELKKETLKN LKEGAILKGV VKNLTDYGAF IDLGGIDGLL HVTDMSWGRI GHPSEMFEVG QEVRVVVLKF DPTSERVSLG LKQIQEDPWH RADEKYPVGT RVKGKVVSLT DYGAFIELEQ GVEGLVHVSE MSWTKRVKHP SKLVNVGDQV EAVVLDIDPK AKRISLGMKQ IEANPWTLLE DKYPIGTTIR GEVRNVTDFG IFVGVEEGID GLVHVSDISW TERIKHPGEK FKKGDVVEAV VLNIDVENER FSLGIKQAHV DPWTTLSERH PVGARVKGRV TKVTDFGAFV EIEPGIEGLV HVSEMKDERV ENPRDVVQEG QEVEVKVIDM DLQDRKVALS MKAVNRDGGE DDYREYLRRQ GDGRARLGDL MEKFNRRK
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