| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_0827 |
|---|
| Symbol | |
|---|
| ID | 3888366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 961080 |
|---|
| End bp | 963293 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 637862348 |
|---|
| Product | superfamily I DNA/RNA helicase |
|---|
| Protein accession | YP_464039 |
|---|
| Protein GI | 86157254 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTCC GCAGCGCAGG CGTCGCCGCG CGCCGGCGCA AGCCGTGCGC GCCGGCCGGC
ATCGTGCGCC CGTCGGAGAG CCCGCTTAAG CTAGACCGCT TGCGCGCGAT CCCTGCCAGC
CCGGCGCCCG ATCTCGAGGG CGAGACGCTC CCCGCGGCGG CGCGCGCCAT CGTGGCGGAG
GAGGAGGCGC TCCTCGCGAC GGTGCAGCGG GCGCTCGCGG CCCGGCTCGC GCCGGCGCGC
GCCGAGGGCG ACCTGGTCGG GCGCCTGCGC GACCTGCGCG ACGAGGCGCT GGAGGCGACG
CCCAAGGACC TGCCCACGGT CTTCCAGGAG ATGGGCCTGC TGCGCGCGGT GATGGAGCGC
GTCCGCCCGG ACCAGCTCCC CGACCCGGCG GCGCCGTACT TCGCGCACCT GCGCGTGCAC
GAGGGCGGCG AGCGGCGCGA CTACTTCCTC GGCCGCCACA CGTTCGTGGA CCGGCCCGCC
GGCGTGCGCG TGGTGGACTG GCGCTTCGCG CCGGTGGCCG GGATCTTCTA CCGCTACCGA
GAGGGCGAGG AGTTCGAGGA GGCGTTCCCG GGCCGGGTCG CCACCGGCAC GGTCGAGGCG
CGGCGGGTGG TGGTGGTGGA GCGCGGGGTG CTGACGCGGA TCGCGGCCGG CCCGCTCACG
CTGGTGCGCG AGGGCGGCCG CTGGCGCGCG CTGGCGGCCG AGGCGGCGGC GCTCGGCGGC
GGGGCGGGGT CGGCGGCGCG CGCCGGCGCG CTCGGCACCG GCGCCGGGGC GGCGGGCCGG
GCCGGCCCGG CGGACATCAC CGCGCTGCTC GATCCGGACC AGTACGAGGC GGTGGCGGCG
CCGGCGGACC GGCCCCTGCT CGTGCTCGGC TCGGCCGGCA GCGGCAAGAC CACCGTGGCG
CTGCACCGCC TCGCCCGCAT CGCGTTCGAG GACCCGCGGC GCTTCCCGGC CTCGCGGCTG
CAGGTGGTGG TGCCGGAGCT CGGGCTGGCC CGGCTCGCGG CGCGCCTGCT CGCGCCGCTC
GGCCTGGAGA AGGCGCCGGT CCGCACGCTC GAGTCCTGGT CGCGCGGCGC GTTCCAGAGC
GTGTTCGGCG CCCCGCCGCC GCGGCTGTTC CCGGAGACGC CGCCGCTGGT GGCGCGCCTG
AAGCGCCACC CGGCGCTGTA CGAGCTGCTG CGCCGGCGGC CGCACCTCGC CCGCGAGCGG
CCGGCGCTGG CGCGGCTGCG CCGCGAGCTC GGCGACCTGT TCGTCGATCG CGGGTTCCTG
GAGGCGGTGG TGAAGGCGGC CGCGGGGACG CTGCCGGCGA CGGCGATCGA CGAGACGCTC
CGCCACACGC GGCTGCAGCT CTCCTCGTCC ACCGAGGACC TGCTGGCGGG CGTGGACCCG
GAGCGGCTCC AGACGCTGGA CGGCAAGGCG GTGGACGAGG ACACGCCCGA GGCCGCCGCC
GGCACCCTCG ACGTCGAGGA CCTGCCCATC CTGCTGTTCC TCGCGGCGCT CCGGGCGGGC
GCGCCGGCGC GCAAGGCGGC GCACCTGGTG GTGGACGAGG CGGAGGACGT GACGCTGTTC
GAGCTGCACG TGCTAGGGCG GCACCTCGCC GGCACCAGCG TCACGCTCGC GGGCGACGAG
AGCCAGCAGA CCTTCGCGTC CTACGCCGGC TGGCCGCAGG CGCTCGCGGC GCTGGGCGCG
CCGGCGGCCG CCACGGTGCG CCTGGCGACG ACCTACCGCT GCCCGGAGCC GATCGCCGAG
GTGGCCCACG CCGTCCTCGG GCCGATCGCC CCGCCGGAGC GGCCGCGCGC CGGCCGGCGC
GGCGCGCCGG TGTCGCGCTT CGACTTCCCC ACCGAGGCGC ACGCCCACCT GTTCCTGGCG
GGCGCGCTGC GCGACCTGGT GGAGCGGGAG CCGGGCGCGT CGGCGGCGGT GGTGTGCAGC
GGGCCCGAGG TCGCGCGGAG CCTGCACCGG CTGCTGGCCG ACATGCCGGA GGCGCGGCTC
GCGCTCGACG GCGCGTTCAC GTTCCGTCCA GGGGTGGACA TCACCGACGT GGACGGGGTG
AAGGGGCTCG AGTTCGACTA CGTGGTCGTG CCGGACGCCA CCGCCCGCGC CTACCCCGAG
ACCGACGAGG CGCGCCGCCG GCTCCACGTG GCGGTGACCC GGGCCGCCCA CCAGCTCTGG
ATCGCCGCGC CCGGGACGCC GTCCCCGCTG CTGCGCGGCC TGCCGCGCGG CTGA
|
|---|
| Protein sequence | MLLRSAGVAA RRRKPCAPAG IVRPSESPLK LDRLRAIPAS PAPDLEGETL PAAARAIVAE
EEALLATVQR ALAARLAPAR AEGDLVGRLR DLRDEALEAT PKDLPTVFQE MGLLRAVMER
VRPDQLPDPA APYFAHLRVH EGGERRDYFL GRHTFVDRPA GVRVVDWRFA PVAGIFYRYR
EGEEFEEAFP GRVATGTVEA RRVVVVERGV LTRIAAGPLT LVREGGRWRA LAAEAAALGG
GAGSAARAGA LGTGAGAAGR AGPADITALL DPDQYEAVAA PADRPLLVLG SAGSGKTTVA
LHRLARIAFE DPRRFPASRL QVVVPELGLA RLAARLLAPL GLEKAPVRTL ESWSRGAFQS
VFGAPPPRLF PETPPLVARL KRHPALYELL RRRPHLARER PALARLRREL GDLFVDRGFL
EAVVKAAAGT LPATAIDETL RHTRLQLSSS TEDLLAGVDP ERLQTLDGKA VDEDTPEAAA
GTLDVEDLPI LLFLAALRAG APARKAAHLV VDEAEDVTLF ELHVLGRHLA GTSVTLAGDE
SQQTFASYAG WPQALAALGA PAAATVRLAT TYRCPEPIAE VAHAVLGPIA PPERPRAGRR
GAPVSRFDFP TEAHAHLFLA GALRDLVERE PGASAAVVCS GPEVARSLHR LLADMPEARL
ALDGAFTFRP GVDITDVDGV KGLEFDYVVV PDATARAYPE TDEARRRLHV AVTRAAHQLW
IAAPGTPSPL LRGLPRG
|
|---|
| |