| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1029 |
|---|
| Symbol | |
|---|
| ID | 3848843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1167594 |
|---|
| End bp | 1170203 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637840701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_441583 |
|---|
| Protein GI | 83720259 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGCGG CGGGCAAAGC GATTCCGGCC GGCCGCCGCT TCGGCCCAGT CGATCTGCTG
CGCCAGGCGG GGCGGATGAC GCTGCGCGAC TGGCGCGCGG GCGAGCTGAC GCTCGTCGCG
CTCGCGCTCG TGCTCGCCGT CGCGGCGCTC ACGAGCGTCG GCTTTCTCGC CGATAGGCTG
CGCCAGGGGC TCGAGCGCGA CGCGCGCCGG ATGCTCGGCG CGGATTTCGT CGTGCGGGCC
GATCATCCGG TCGATCCGGC ATTCGCGCGC GAGGCGCGAT CGCTCGGCCT CGCGACCGCG
ACGACCGCGA TCTTCCCGAG CATGGTCGGC GCGGCCGATG CGCCCGACTC ATCCGGCACG
CCCGCCGCCG CGTCCGGAGC GAGCGGCTCG CCGCCCGTGC GGCTCGCGGC CGTGAAGGCC
GTGTCGGCGG GCTATCCGCT GCGCGGCGCG GTCGAGATCG CGCCCGGCGC GAACGCGCCC
GGCCGCGCCG CCGGTTCGAT CCCGGCTCCC GGCGCCGTAT GGGTCGATCC GTCGCTGCTC
GACGCGCTGC ATCTGAAGGT CGGCGATGCG TTGCGCGTCG GCGGCCGCAC GTTCGCGATC
GGCGCGGCGA TCACCCGCGA GCTCGACCGT GGCTTCTCGT TCGTCAATTT CTCGCCGCGC
GTGATGCTGC GCGCGGACGA GCTCGAGTCG ACGGGGCTCA CCGGCTACGG CAGCCGCGTC
ACCTATCGCC TGCTCGTCGC GGGCGACGAT GCCGCCGTCG GGCGCTTCGC GCGCTACGCG
CATGCGCGCG TCGATGGCGG CAAGCTGCGT GGCGTCGCGC TCGAATCGCT GCAGGAGGGA
CAGCCGCAGG TGCGGCAGAC GCTCGACCGC GCGCGCCATT TCCTCACGCT CGTCGCGCTG
CTGACGGCGC TGCTCGCGGC CGTCGCGATC GCGATGGCGG CGCAGCGCTA CATGCGCCGC
CATCTCGACG GCTGCGCGGC GATGCGATGC CTCGGCGCCA GCCGCCGCGC GCTGTCCGCG
CTGTTCGCGA TCGAATTCGC GCTGCTCGGC GTCGCGGGCG GCGCGGCGGG CGCGGCGCTC
GGCTACGTCG GCCATCTCGC GCTGCTGCGC GCGCTCGGCA GCCTGATCGA CGTCGTGCTG
CCGCCGCCGT CCGTGTGGCC CGCGGCGATC GGCATCGCGG CTGGGCTCGT GCTGCTGCTC
GGCTTCGCGC TGCCGCCGCT CGCGCCGTTG ACGCGCGTGC CGCCCGCGCG CGTGCTGCGC
CGCGAATGGG GCGACGCCGG CCGTGTCGCG TGGCTGGGCT ACGCGGTGGG CATCGCGCTC
TTCGCGGCGC TCCTGATCGC GGCGGCGGGC AACCTGACGC TCGGCGCGAT CGTCGCGGGC
GGCTTCGCGG GCAGCCTCGT GCTGTTCGCG CTCGTCGCGC GGCTCGCGCT GTTCGCGCTC
GCGCGCGTCG TGCGCGACGG CCGCGTCGCG GCGGGGCTCG GCTGGCGCTA CGCGCTCGCG
TCGCTCGACC GGCGCGGCGC CGCGAGCGCG CTGCAGATCA CCGCGCTCGC GATCGGCCTG
ATGTGCCTGC TCCTCATCGC GATCACGCGC AACGATCTCG TCGCCGGCTG GCGGCGGTCG
ACGCCGCCCG ACGCGCCCAA CCAATTCCTG ATCGACATCC AGCCCGACCA GCGCGACGAC
GTCGTCCGCT ATCTCGCGGC GAGCGGCATC GTGAATCCGG CGCTGTCGCC GATGGTGCGC
GGGCGGCTCG TCGCGGTGAA CGGCAAGCCG GTGAACCCGG ACGACTACAA GCGCGACGAA
GCGCGCCGCC TCGTCGACCG CGAATTCAAC CTGTCTTACA CGACGCAGTT GCCCGAAGAC
AACCGGCTCG TCGCGGGCGA CTGGTTCGGC GCATCGAGCG TGCCGCAGAT CTCGATCGAG
GCGGGGCTCG CGAAGACGCT CGGCGTGAAG CCGGGCGACA CGCTGCGCTT CGACGTGACG
GGCCTGACCG TCGACGCGCC GGTGACGAGC GTGCGCAAGC TCGACTGGGG CACGTTCCGC
GTGAACTTCT TCGTGCTGAT GCCGCCCGCG GCGCTGCGCG ATTTTCCGGC CACCTACATC
ACGAGCTTCC ATCTGCCGCC CCCGCGCCAG CGCGTGCTCG ACGGCCTGAT CGCGCGGTAT
CCGAACCTGA CGGCGATCGA CGTCGGGCCG ATCCTCGCGC AGCTCGAGCG CGTGCTGCTG
CAGGTGGTCG GCGCGGTGCA GTTCCTGTTC GGCTTCACGC TCGCGGCGGG CGTGCTCGTG
CTATATACGG CGCTAGCCGG CTCGCGCGAC GAGCGCGTGC GCGAGGCCGC GCTGATGCGC
GCGCTCGGCG CGTCGCGCAA GCAGATCGTC GCCGTGCAGC GCGCGGAGTT CGTCGTGGTC
GGCGTGCTCG CGGGCGCGAT GGCGGCGGCG GGCGCGCTCG CGGTCGGCGC GGTGCTCGCG
TCGCGCGTGT TCGATTTCCA GCTCGCGCCC GATCCGTGGC TCGTGCCGGC CGGCATCGCG
GCGGGCGTCG CGTGCGCGGG CGCGGCGGGG TGGCTCGGCT TGCGCGGCGT GCTGCGCAGG
CCGGCGCTGC AATCGCTGCG CGATGCATGA
|
|---|
| Protein sequence | MTAAGKAIPA GRRFGPVDLL RQAGRMTLRD WRAGELTLVA LALVLAVAAL TSVGFLADRL
RQGLERDARR MLGADFVVRA DHPVDPAFAR EARSLGLATA TTAIFPSMVG AADAPDSSGT
PAAASGASGS PPVRLAAVKA VSAGYPLRGA VEIAPGANAP GRAAGSIPAP GAVWVDPSLL
DALHLKVGDA LRVGGRTFAI GAAITRELDR GFSFVNFSPR VMLRADELES TGLTGYGSRV
TYRLLVAGDD AAVGRFARYA HARVDGGKLR GVALESLQEG QPQVRQTLDR ARHFLTLVAL
LTALLAAVAI AMAAQRYMRR HLDGCAAMRC LGASRRALSA LFAIEFALLG VAGGAAGAAL
GYVGHLALLR ALGSLIDVVL PPPSVWPAAI GIAAGLVLLL GFALPPLAPL TRVPPARVLR
REWGDAGRVA WLGYAVGIAL FAALLIAAAG NLTLGAIVAG GFAGSLVLFA LVARLALFAL
ARVVRDGRVA AGLGWRYALA SLDRRGAASA LQITALAIGL MCLLLIAITR NDLVAGWRRS
TPPDAPNQFL IDIQPDQRDD VVRYLAASGI VNPALSPMVR GRLVAVNGKP VNPDDYKRDE
ARRLVDREFN LSYTTQLPED NRLVAGDWFG ASSVPQISIE AGLAKTLGVK PGDTLRFDVT
GLTVDAPVTS VRKLDWGTFR VNFFVLMPPA ALRDFPATYI TSFHLPPPRQ RVLDGLIARY
PNLTAIDVGP ILAQLERVLL QVVGAVQFLF GFTLAAGVLV LYTALAGSRD ERVREAALMR
ALGASRKQIV AVQRAEFVVV GVLAGAMAAA GALAVGAVLA SRVFDFQLAP DPWLVPAGIA
AGVACAGAAG WLGLRGVLRR PALQSLRDA
|
|---|
| |