Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0622 |
Symbol | |
ID | 3849548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 712778 |
End bp | 714511 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637840295 |
Product | ABC transporter, permease protein |
Protein accession | YP_441179 |
Protein GI | 83721275 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.974314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCATC ATGCCGACCT GCTGACCAGC GGGCGCTGGC GACTGCGCAC GCTCGGATGG CGCGACGCGG TCGCGCTGCT GCTCGTGCTC GCGCTCATCG TCGTGCTCGG CTCCGGCGCG CGCCAGATGG CGCTGCCGCT CGGAGCCGCG CGGCCCGAGG CGATCTCGCT GTCGCCGCTC GCGCTGCCGG GCTACACGCT GCGCACCGTG CTGCGCATGC TCGCCGCGCT CGGCGCGTCG TTCGTGTTCA CGTTCGCATA CGCGAGCCTC GCCGCGAAAA GCCGCGCGGC GGAGGCCGTG CTGATCCCGC TTCTCGACGT GCTGCAGTCG GTGCCGATTC TCGGCTACCT GTCGTTCACC GTCGTGTTCT TCCTGTCGAT CGCGCCCGGC AGCACGTTCG GCGCGGAGCT CGCGGCGATT TTCGCGATCT TCACGAGCCA GGCGTGGAAC ATGGCGTTCA GCTTCTATCA GTCGCTGCGC ACGGTGCCGC GCGATCTCGA CGAGGCGAGC CGCAGCCTGC GGCACACGGG CTGGCAGCGC TTCTGGCGGC TCGAGGTGCC GTTCGCGATG CCGGGCCTCG TGTGGAACGC GATGATGTCG ATGTCGGGCG GCTGGTTCTT CGTCGTCGCG TCGGAGGCGA TCTCCGTCGG CGATCTGCGC ATCGCGCTGC CCGGCGTCGG CGCCTACGTC GCGCGCGCGA TCGCCGAGCG CAACCTGGCC GCCATCGGCT TCGCGATCGC CGCGATGACG ATCGCGATCG TGCTCTACGA TCAGTTGCTG TTCAGGCCGA TGGTCGCATG GGCGCACAAG TTCCGCTGCG ATCAGACCGT GAGCGGCCCC GCGCCGCGCA GCTGGCTTCT GGATCTGCTG CATCGCGCGA GCCTGCCGCA ACGCGTCGGC GCGCCGCTCG GCGCGATGCT GCATCGCGCG GCGCGCGCGC GCCTGTCGCT CGGCGTGCGC CTGTCGGCGC GCGAGCGCTC GCTGTCGCGG CGCGCCGGGC GCGTCGTCTG GTTTTCGCTA TGCGCGGCGG GCGCCCTCTA TGCCGGCGCC GCGCTCTTGC GAATCGCGGC GCCCGCGCTG TCGTGGTCCG ACGTCGCCGA CGTCGCGCGC AACGGCGCGC TCACGCTCGC GCGCGTGCTC GTGCTGATCG GCATCGCGAC GGCCGTCTGG GTGCCGGCCG GCGTGCTGAT CGGACTGCGG CCTCGCGCGA CCGCCCTCGT GCAGCCCGTC GCGCAGTTCC TCGCCGCGTT CCCCGCGAAC CTGCTGTTCC CGCTCGCGGT ATTCGCGATC GTGCGCTTCA GGCTCGCGCC CGCGATCTGG CTCAGTCCGC TGATGATCCT CGGCACGCAG TGGTACATCC TGTTCAACGT GATCGCCGGC GCGAGCGCGT TTCCCGACGA TCTGAAAGAA GCGGCGGCGA GCCTGCGCGT GCGCACGCCC ACATGGTGGC GCGAGATCGT GCTGCCCGGC ATCCTGCCGT ACTACGTGAC GGGCGCGATC ACCGCGTCGG GCGGCGCATG GAACGCGAGC ATCGTATCGG AGCTGGTCGG CTGGGGACCG ACGACGCTCG ACGCGTCCGG CCTCGGCGCG TACGTCGCTC GGACGACCGC GGCGGGCGAC TATCCGCGGA TCGCGCTCGG CGTCGCCGCG ATGTCGCTGC TCGTGATCGC GATGAATCGT CTGATGTGGC GGCCGCTCTA TGCGTTCGCC GAACGCCGCT CCCGTCTCGA CTAG
|
Protein sequence | MEHHADLLTS GRWRLRTLGW RDAVALLLVL ALIVVLGSGA RQMALPLGAA RPEAISLSPL ALPGYTLRTV LRMLAALGAS FVFTFAYASL AAKSRAAEAV LIPLLDVLQS VPILGYLSFT VVFFLSIAPG STFGAELAAI FAIFTSQAWN MAFSFYQSLR TVPRDLDEAS RSLRHTGWQR FWRLEVPFAM PGLVWNAMMS MSGGWFFVVA SEAISVGDLR IALPGVGAYV ARAIAERNLA AIGFAIAAMT IAIVLYDQLL FRPMVAWAHK FRCDQTVSGP APRSWLLDLL HRASLPQRVG APLGAMLHRA ARARLSLGVR LSARERSLSR RAGRVVWFSL CAAGALYAGA ALLRIAAPAL SWSDVADVAR NGALTLARVL VLIGIATAVW VPAGVLIGLR PRATALVQPV AQFLAAFPAN LLFPLAVFAI VRFRLAPAIW LSPLMILGTQ WYILFNVIAG ASAFPDDLKE AAASLRVRTP TWWREIVLPG ILPYYVTGAI TASGGAWNAS IVSELVGWGP TTLDASGLGA YVARTTAAGD YPRIALGVAA MSLLVIAMNR LMWRPLYAFA ERRSRLD
|
| |