| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2190 |
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| Symbol | prpR |
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| ID | 3846505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 2690109 |
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| End bp | 2692316 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637839491 |
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| Product | propionate catabolism operon regulatory protein PrpR |
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| Protein accession | YP_440378 |
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| Protein GI | 83717932 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTGGT CAGATGATTT CAATATGGAA ATTGAAATTC CAAAATTGAA ATCCACGCGC
GATAATGCAA TTCATCTTCT GTCATCGCCC CGACGCGGCG CGCGCCGCGT TCCTTCACTC
AGCATGAGCA CCCTACCCGA AACCGGCGTG CGGCCGCGCG TCTGGGCGGT CGGCATCAGC
CGGCTGCGCG CGCTCTTTCG CGACATCGCC GACGAATACG AGGAGCGCGC CGACCTGCGG
ATCATCGCGC GCGGCTACGA GGAGGCGATC ACCGCGCTCG CGACGGCGGG CGCCGAGCGC
CCCGACGCGA TCGTCGCCGC CGGCTCGAAC GGCACCTATC TGAAGGCGCG CGTGCGCGTG
CCCGTCGTGC TCGTCAACCC GACCGGCTTC GACGTGATGC ACGCACTCGC CCGCGCGCGG
CGCGACGCGC GCCGGATCGC GCTCGTCAGC TACGGCGAGA CGCCGCCCGA GGTGCGCAGC
TTCGCGGCCG CGTATGGGCT CGACGTCGTG TTCGCGTCGT ACCAGAGCGC GCAGGAGGCC
GAGACGCGCG TGCTCGAAAT GCGCGAGCGA GGCATCGAGA CCGTCGTCGG GCCGGGGCTC
GTCACCGATC TCGCGGCGAA TGCCGGGATG GGCGCGGTGT TCGTCTATTC GCACGCGTCG
GTGCGCGCGG CCGTCAACAC GGCGCTCGAG GTCGCGCATG CGACGCACGC GGAAGCGCTG
CGCCGCGAGC GCCTCGACAA CCTGCTGCAG CATCTGCGCG ACGGCGTCGT CGCGCTCGAC
CGCGAGGGCC GCGTCGAGGC GATCAACGAG CGGCTCGCGC TCGCGCTCGG CGTGTCGCCG
TCGGCCGCGG TGGGCCGCGC GCTGGACGAC CTGACGCCCG AGCTGCGCAC GCTGCGCGCG
GCCGACGGCG ACACGCTCGC GACCGTGCGC GGCGTGCGCT ACGTCGTCCA TCGCGGGCCG
CTCGCCGCGA GCAGCGGCGC GCCCGGCAGC GTGTTGACGT TCCAGGAATC GCGCGCGGTC
GAGCGGCTCG ACCGCACGCT GCGCTCGCAT CAGCACGCGC AGCAGTTCAC CGCGCGCTAC
CGGCTCGACG ACATCGTCGG CGCGACGCCC GCGATCGCGC ACGCGCGCGA TCTCGCGCGA
CGCTACGCGA AATCGGACGC GACCGTGCTG ATCCTCGGCG AGAGCGGCAC CGGCAAGGAG
ATGATCGCGC AGAGCCTGCA CGCGCTGTCC GCGCGCCGCA AGTATCCGTT CGTCGCGGTC
AACTGCGGCG CGTTTCCCGA ATCGCTGCTC GAGAGCGAGC TGTTCGGCTA CGAGGAAGGC
GCGTTCACCG GCGCGCGGCG CGGCGGCAAG GCGGGGCTCT TCGAAGCCGC GCATCGCGGC
ACGCTGTTTC TCGACGAAAT CGGCGAGATG CCGCCGTCGC TGCAAAGCCG GCTGCTGCGC
GTGCTGCAGG AGCGCGAGGT CGTGCGCGTC GGCTCGACCG AGCCGGTTCC GATCGACATC
CGCGTCGTCG CGGCGACGCA CCGGCCGCTC TTCGCGGCCG TCGAGGCCGG CGCGTTCCGC
GCGGATCTGT ATTACCGGCT GAACATCCTG AACATTGGGC TGCCGCCGCT GCGCGAGCGC
GCGGCCGACA TTCCCGCGCT CGCCGCGACG CTGCTCGCGC AGGCCGCACG GCGCGAGCCG
CGGCTCGCCG AGCGGCTGCG CGACGCGCAC GACGCGGCGC GCGCGCTCGA CGCCGCGAAC
GCCGCGCTGA TCCGCTATCG ATGGCCCGGC AACGTGCGCG AGCTGCAGAA TGTGATCGAG
CGGATTGCGG TGGAGCTCGC CGACGCAGCC GAGCGCGGCG ACGCGGCCGT GAGCGTCGAC
ACGCTGCGCG CGATCGCGCC CGAGGTGCTC GCGCTCGATG CGTTCGCGGC AGGCCGCGGC
GGCGACCTGA ATGGCGGCGA TGTGGGCGGC GATGTCGGCC GCGACGCCGA TGCGCGGCGC
CCGACGCTCG TGCAGCGCCG CCGGCGCGCG GAAGCCGACG AGATCCGCGC CGCGCTCGAC
GCATGCGGCG GCGATCGCGA TCGCGCATGC GCGATGCTCG GCATCAGCAA GACGACGCTG
TGGCGCAAGC TCGCGGCGAG CGAAGGGAAA GCGCGCGGCG GTGGTGGCGG TGGTGGCGGC
GGCAACGACC ACGGCGACGA TGCCCAGAGC CCCGCCTCCC GTTCCTGA
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| Protein sequence | MRWSDDFNME IEIPKLKSTR DNAIHLLSSP RRGARRVPSL SMSTLPETGV RPRVWAVGIS
RLRALFRDIA DEYEERADLR IIARGYEEAI TALATAGAER PDAIVAAGSN GTYLKARVRV
PVVLVNPTGF DVMHALARAR RDARRIALVS YGETPPEVRS FAAAYGLDVV FASYQSAQEA
ETRVLEMRER GIETVVGPGL VTDLAANAGM GAVFVYSHAS VRAAVNTALE VAHATHAEAL
RRERLDNLLQ HLRDGVVALD REGRVEAINE RLALALGVSP SAAVGRALDD LTPELRTLRA
ADGDTLATVR GVRYVVHRGP LAASSGAPGS VLTFQESRAV ERLDRTLRSH QHAQQFTARY
RLDDIVGATP AIAHARDLAR RYAKSDATVL ILGESGTGKE MIAQSLHALS ARRKYPFVAV
NCGAFPESLL ESELFGYEEG AFTGARRGGK AGLFEAAHRG TLFLDEIGEM PPSLQSRLLR
VLQEREVVRV GSTEPVPIDI RVVAATHRPL FAAVEAGAFR ADLYYRLNIL NIGLPPLRER
AADIPALAAT LLAQAARREP RLAERLRDAH DAARALDAAN AALIRYRWPG NVRELQNVIE
RIAVELADAA ERGDAAVSVD TLRAIAPEVL ALDAFAAGRG GDLNGGDVGG DVGRDADARR
PTLVQRRRRA EADEIRAALD ACGGDRDRAC AMLGISKTTL WRKLAASEGK ARGGGGGGGG
GNDHGDDAQS PASRS
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