Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2179 |
Symbol | |
ID | 3844902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2676032 |
End bp | 2677795 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637839480 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_440367 |
Protein GI | 83717273 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00530113 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCT GTAGCAATGA CACGCAACAG CCGCCCAGCC TAACATGCCG CTCTCCCGTT CGCATCATGG TGTCCGGCAT GCACGACGCG CCTTCTCGAT CCGCTCCGAT GGAGCCCGTC CTTCCTGCGT CGGGGCCGCC CGCCGCGTCC ACGTCCGTCC GCTCGCCCGT GCCGGCGCCC CTTGCCGCGC CGTGCGCCGA CGCGCCGCCC GCGCACCGCA GCGCCGCGCG GCACGCGCTC GCCACCGCGT CCGCGGTCTG CTCGCTGATC GTGCTCGACA CGAACGTCGT CGCGGTATCG CTGCCGTCGA TCGCCCGCAC GTTTCATGCG AGCTTCGCGG ACATCGAATG GGTGGTGAGC GCGTACATGA CCGCGTTCGC CGCTTGCCTG CTGCCGGCGG GCGGCCTCGC CGACCGCGCG GGCCGCAAGC GCGTGCTGCT CGCCGGGCTC GCCGTGTTCT TCGTCGCGTC GCTCGGCTGC GGGCTCGCGC CGTCGGCCGC ATCGCTCAAC GTCGCGCGCG CGGTCAAGGG CGTCGGCGCC GCGATGCTGC TGACGTCGGC GCTCGCCGTG ATCGCGAACC GCTTCCCCGA CGGCCGAGAC CGTGCGCGTG CGTGGGCGGT CTGGGGCATG TGCATGGGCA TCGCGACGAC GATCGCCCCG CTCGCCGGCG GCGCGATCGC GCAATGGATC GGATGGCGCT GGATCTTCCT GCTGAACCTG CCGGTGTGCA TCGCGCTCGC CGCGGCCGTC TGCGCGACGA TCGACGATTC GCGCGATCCG CACGCAAAGC GCATCGACGC GCCGGGCAGC GTGCTGTTCG GCTCGGCGCT CGCGCTCGGC ATCTGGGCGC TGATCGACGC GCCGCCGCAC GGCTGGGCGG CGCCCGGCAC GCTCGCGCGC TTCGCGGCGA GCGCGGCGCT CTTCGTCGCG TTCGCGGCCG CCGAGCGCTG GCAGCGGCGT CCAATGATCG ATCTCGCGCT GTTTCGAGAG CCACGCTTCG TCGGCGCGCT GCTCGCGATG TTCGGCTACG CGGCGTGCGC GCAGGTGATG ATGACGTTCT TGCCGCTCTA CCTGCAGATC GGCTTCGGGA TGTCGGCGAT CGCCGCGGGG CTCGGCATGC TGCCGTTCGC GCTCGCGATG ATCGTCGGGC CCTCGCTCGG CGCGGCGCTG TCGGCGCGCG CGCCGGCCGC GACCGTGCTC GGCTGCGGGC TCGCGCTGAT CGGCATCGGC GATTTCGTGA CCGCCGCGCT CGCGGGCGCG TCGCATGACG GTCTCGTCGC GCTCGGGATG CTGGTCACCG GATGCGGCGC GGGCATCCTG AACGGCGACA CGCAGAAGGC GATCATGGCG TGCGTGCCGC CGGAGCGGAC CGGAATGGCG TCCGGGATCA GCACGACGAC GCGTTTTTCC GCAATCGTGA CCTCGGTCGG CGTGCTCGGC GCGGTGCTCG CCGCGCGAAC CCACGCGGCG CTCGCCGAGC GCGTCGCGCA CGCGCCGGAG CTGCTCGGCG CGCTCGATCC GCGCTTCATG TCGAGCCTGC TCGCGGGCGA TCTCGCGCAG GCGATACGCG GCCTGCCGCC GCAAACGGGC GCGGCGCTCG CGCAAATCGC GCCCGCCGGC TTCGCGAGCG GCTTCGCGCT CGCGCTGTGC GTGAGCGGCG CGTTCGCGCT CGCGGCGGCC GTCGCGGTGC GGCTGCTCGT CGGCGCGAAG CCGGGGCGGG CCGCAGGAGC GCGCTCGATG CGCGGCAAGC GGAGCGGCCG ATGA
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Protein sequence | MNFCSNDTQQ PPSLTCRSPV RIMVSGMHDA PSRSAPMEPV LPASGPPAAS TSVRSPVPAP LAAPCADAPP AHRSAARHAL ATASAVCSLI VLDTNVVAVS LPSIARTFHA SFADIEWVVS AYMTAFAACL LPAGGLADRA GRKRVLLAGL AVFFVASLGC GLAPSAASLN VARAVKGVGA AMLLTSALAV IANRFPDGRD RARAWAVWGM CMGIATTIAP LAGGAIAQWI GWRWIFLLNL PVCIALAAAV CATIDDSRDP HAKRIDAPGS VLFGSALALG IWALIDAPPH GWAAPGTLAR FAASAALFVA FAAAERWQRR PMIDLALFRE PRFVGALLAM FGYAACAQVM MTFLPLYLQI GFGMSAIAAG LGMLPFALAM IVGPSLGAAL SARAPAATVL GCGLALIGIG DFVTAALAGA SHDGLVALGM LVTGCGAGIL NGDTQKAIMA CVPPERTGMA SGISTTTRFS AIVTSVGVLG AVLAARTHAA LAERVAHAPE LLGALDPRFM SSLLAGDLAQ AIRGLPPQTG AALAQIAPAG FASGFALALC VSGAFALAAA VAVRLLVGAK PGRAAGARSM RGKRSGR
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