Gene BTH_II2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II2004 
Symbol 
ID3845102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2450618 
End bp2452303 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content53% 
IMG OID637839305 
Productadenylosuccinate synthase 
Protein accessionYP_440198 
Protein GI83716069 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00819563 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC GTCAGATTGT CGTCATTAGC GGAAAGGCCT GTAGCGGTAA GACCGGACTT 
GCCGATCTAC TTGAACAGGA GTTTCAGTTC CGCGTTGTCC GTACCAGGCA GGTATTGGTT
GACTTTTGCG ATGCCGAAAT CGATGAAAAC GAGCTGGTAA CTTTGATAAC GCGGAAGCAG
GAAGTAAATG AAACCACCGA TTCGAGGTGG CTGCTACGTG CCACGCTTGA GGTATTAGAA
GGTCTGGACC CGGCTAAATC AGTGGTCGTA GACCATGTCA GTAGCCCTTT GCAAGTAGCT
CAATTTCGGC GAGTATTCGG TGAAAATCTC ATTCACGTTC ACCTATACGC AAGTAAGGAA
ACGTTGCAGG AGCGGTACGC CCAAACGGAG GCGGCAAAGA AGAATGTCCT CTCATATGAT
GAAATAGACC GCTTAAAAGA TGAGAAGGAC ATTGAAGCGC TTAAGAACGA TGCCGATGTC
CGTATCTACA CTACTCGTTC CGATGCCCAA GACACTTTGG TTCGAGTTGC CGCCCGCTTG
CACTTGTTTA CCCCGCCTGA TATTCGATGC GTCGACGTGT TGATCGGCGG TCAGTATGGC
AGCGAGGGCA AGGGGAACGT TGTTTCGTAC CTCGCTCGCG AATATGACGT AATGGTGCGG
GTTGGGGGGC CAAATGCAGG ACATACTGTA GCCAGCGCGA ACGGACCCTA TACATATCAT
CATCTGCCCT CCGGGGCTCG CGACGTGGAT TCTCGCTTGC TTCTTGGTCC GGGGATGACC
ATTCGTCTCA AAGGTCTATT CGAGGAAATT TGCGACTGCA ACATTGGACC GGACCGATTG
TTTATCGATC CACAGGCGAC AATTATTGAA GACAAGGATA TCGAGAGTGA AGGCCAACAT
CTCGTCTCGA CTATCGCGTC GACTGGCAGC GGCAGCGGTG CTGCTACAGC TCGGCGTATC
ATCAGTCGTG GCAGTTCAGA CTTTCGTATG GCTCGCGACG TCCCCGCACT CGCGCCTTAT
GTCGGTACGC CGGGAAATTA CCACGGCGCT ACCGCCGATC GCTTGGAAGA AGCCTACCGG
AAACGGCAAT CCATCCTACT CGAAGGCACC CAAGGTAGTG GGCTAAGTCT CTTTCACGGC
ACATACCCAT ATGTGACCTC GCGCGATACC AACGTTGCTG GTTGCCTCGC GGAGGCCGGC
ATCTCACCGA GCCGCGTGCG CAAAATTCTA ATGGTGATCC GCCCGATGCC CATTCGGGTG
GGTGACCCGG ATGGCAATGA AGGGCACACT TCGGGTCCAC TCAAACATCC GACGACGTTC
GATGCCATTG CGAGACACGC GGATCTTGAT GCCGCTGCGT TGCATAGTGC CGAAAAGACT
TCGACGACCA AACGAAAGCG TCGTGTCGGT TGGTTTGAAT GGGACCAATT TCGCAGGGCC
TGTGCCCTTA ATGCGCCGAC AGATATTGTT CTGACGTTTG CGGACTATAT CAACGCCAGC
AACCGAAATG CGCGTCGTTT TGAACAATTG ACGCAAGAAA CCATCAAGTT TGTTGAGGAG
CTTGAACGCG TTTCGCAGGC GCCGGTTTCG CTTATAAATA CCCGCTTTCC GCGCCAGGAA
GAGGGTATAG ACGATTTACG CTCACTAATC GACCGTCGCA ATTGGACAGC TCGCTCCCGT
GCTTGA
 
Protein sequence
MSNRQIVVIS GKACSGKTGL ADLLEQEFQF RVVRTRQVLV DFCDAEIDEN ELVTLITRKQ 
EVNETTDSRW LLRATLEVLE GLDPAKSVVV DHVSSPLQVA QFRRVFGENL IHVHLYASKE
TLQERYAQTE AAKKNVLSYD EIDRLKDEKD IEALKNDADV RIYTTRSDAQ DTLVRVAARL
HLFTPPDIRC VDVLIGGQYG SEGKGNVVSY LAREYDVMVR VGGPNAGHTV ASANGPYTYH
HLPSGARDVD SRLLLGPGMT IRLKGLFEEI CDCNIGPDRL FIDPQATIIE DKDIESEGQH
LVSTIASTGS GSGAATARRI ISRGSSDFRM ARDVPALAPY VGTPGNYHGA TADRLEEAYR
KRQSILLEGT QGSGLSLFHG TYPYVTSRDT NVAGCLAEAG ISPSRVRKIL MVIRPMPIRV
GDPDGNEGHT SGPLKHPTTF DAIARHADLD AAALHSAEKT STTKRKRRVG WFEWDQFRRA
CALNAPTDIV LTFADYINAS NRNARRFEQL TQETIKFVEE LERVSQAPVS LINTRFPRQE
EGIDDLRSLI DRRNWTARSR A