| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1853 |
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| Symbol | |
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| ID | 3844928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2243417 |
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| End bp | 2244862 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637839154 |
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| Product | outer membrane porin OpcP |
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| Protein accession | YP_440047 |
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| Protein GI | 83717688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0277472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAC GGCGTGACCA CCGCGAACGG CGCGCCGGGC TTGCCTGCCG TGCGTGCGGC
ACTCGACGCG CGGTGACGGC CGACATCGGC ATCGGCGCGG TCCGTCGCAT CGTGACCATT
CAACGTCGTT TAGTGACGGG TAGCGCGAAA AATGGGTTTG TATTTTTCGC CAACGGCATC
CGATTGTGCG CGGGATGCGC AACGGTCGTC GGAGTGGTGC GTCGTTTCAG AAATAGTCGC
GGATTCGCGT GCGCAACGCG GGAATCTCTT TTCTTATCGA GTGAGCAGGG TGGGGTGCCG
ACAATGAAGA AATCGAATGT TGCCGTGATG AGCGCGATTG CGCTCGCGAT CGGAGTCGCG
CCGGGCGCAA GCCGCGCGCA GAGCAGCGTT ACGTTATACG GGATTCTCGA TGCCGGTATT
ACGTACGTCA ACAACACCGG CGGCTCGCAC GTCTTCAAGT TCGACGACGG CGTGTCGTAC
GGCAACCGGA TCGGCTTCAA GGGCACTGAG GATCTTGGCG GCGGGCTGAA GGCGGTCTTC
GTGCTCGAGA GCGGTTTTCG CCTGGGCAAC GGCCAGCTCG GTTTCGGCGG CGCGGAGTTC
GGCCGCCAGG CTTACGTCGG ATTGCAGAAC AACTGGGGGA CGCTGTCGTT CGGCAATCAG
CTCGACATGA CCGAGGAGAT GGTCTATCTG AACAACATCT CCGCATGGGC GAGCGGCTAC
GCGATCCACC AGGGCGACTT CGACCGCTTC AACGGCGACC GCCTGCCGAA CTCGGTGAAG
TTCCTGTCGA ACGATTTCAG CGGCTTGCGG TTCGGCGCGA TGTATTCGTT CGGCAACGTC
GCGGGCGACT TCCATCGCAA CAGCGCGTGG AGCGCGGGCG CGAACTACAC GCACGGCGAT
CTGTCGGTGG GCGCGGCCTA TACGCAGTTG AACAATCCGT CTGGCATCTA CGCGTTCGAT
CCGTATGCGA TGATCGGCAC GCGAACCTTC CTCGGGCAGC CGACGGTCAG CGTCGATCCG
GCGACGGGCA AGGTCACCGA CCTGTTCGCG AATACGCCGA TGAATGTCGA CAGCCAGGGC
ACGTTCGGCG TCGGCGCGAG CTACACGATC GACAAGCTGA CGCTATCCGG CAATTTCACG
TATTCGACGA TCAAGGGCTT CGGCAATACG TCGCACATGC AAGTCTACGA AGGCGGCGGC
CTGTATCAGT TCACGCCGGC GTTGAGCTTC GTCGCGGGCT ATCAGCACAC GCGCTTCGAA
GGCCATCACT GGAATCAGGG ATCGGCGGGC GTCCACTACC TGCTGTCGAA GCGCACGGAT
GTCTACCTTT CCGGCGACTA CCTGCGCGCG TCGAACGGCG TCGATGCGGT GATCGGCTAC
AGCTTCACGC CGTCCACCAC GCAGACGCAA GCGGACATCC GCATCGGGAT GCGTCACTCG
TTCTGA
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| Protein sequence | MARRRDHRER RAGLACRACG TRRAVTADIG IGAVRRIVTI QRRLVTGSAK NGFVFFANGI
RLCAGCATVV GVVRRFRNSR GFACATRESL FLSSEQGGVP TMKKSNVAVM SAIALAIGVA
PGASRAQSSV TLYGILDAGI TYVNNTGGSH VFKFDDGVSY GNRIGFKGTE DLGGGLKAVF
VLESGFRLGN GQLGFGGAEF GRQAYVGLQN NWGTLSFGNQ LDMTEEMVYL NNISAWASGY
AIHQGDFDRF NGDRLPNSVK FLSNDFSGLR FGAMYSFGNV AGDFHRNSAW SAGANYTHGD
LSVGAAYTQL NNPSGIYAFD PYAMIGTRTF LGQPTVSVDP ATGKVTDLFA NTPMNVDSQG
TFGVGASYTI DKLTLSGNFT YSTIKGFGNT SHMQVYEGGG LYQFTPALSF VAGYQHTRFE
GHHWNQGSAG VHYLLSKRTD VYLSGDYLRA SNGVDAVIGY SFTPSTTQTQ ADIRIGMRHS
F
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