| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1825 |
|---|
| Symbol | |
|---|
| ID | 3845245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2202839 |
|---|
| End bp | 2204569 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637839126 |
|---|
| Product | ABC transporter, ATP-binding/permease protein, putative |
|---|
| Protein accession | YP_440019 |
|---|
| Protein GI | 83716837 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.63972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CGCTTTCCCG GATGTTGCGC CCGTTCGCGG CGCCGCTCGC CGCCGCGGTC
GCGCTGCAGG CGCTCGCGGG CGTCGCGTCG CTCGTGCCGT GGCTCGCGCT CGGCCGGATC
GCCGAGCACT GGCGCATCGC GGCCGACCTC GACGGCGCGG CGCGCGAGTG GCTCGCGGCG
GCGGTCGCGG CCGGCGTGTG CTGGCTGTCC GGCCAGACGA TCGCATTGCA TCTCACGCAC
CGCGTCGACG CCGATCTGAG CGACCGGCTG CGCAAGCGCC TCGCCGATCA CTTGCAGCGG
CTGCCGCTCA CCTGGTTCGC GCGAACGGGC AGCGACCGGA TCGCGCGCTA CGTCGATCAG
GACGTGCGCG CGCTGCATCA GCTCGTCGCG CATGCGCCGG CCGACGTCAC GCAATTGATC
GTCGTGCCGG GCGCGGCGCT CGCGTGCCTG CTTTATCTGA ATCCGGCGCT GCTCGCGTTC
GCGCTCGCGC CGCTCGTGCT CGGCGCGGCG CTGTTCCGCC GGATGCGCTC GGCGCGCTTC
GTGCCCGCGT TCGCGGACCG GAACGCGGCG CTCGAGAAGC TGATGGGCGA CTACGCGGAG
TTCGCGCGGA ACCCGGCGCT CGTGCGCCAG TACCCGGGGG CGGGGATCGA GGCGGTCGTG
CTCGATTCGG TCGCGCGCTT CGAGCGCGCG TTCTCGGCAT GGGTCGGCCG CATCGGCGGG
CTCGGCGCGT GCACGCAGGT GTTGCTCGGC ACGCCGCTGC TGCTCGCGTG GGTCGTGCTC
GGCGCGATGG GGGTCGCGCT CGCGCGCTCG CCGATCGGCG AGCTCTGCGT GTTCGCGCTG
CTGATCTGGG CCGTCGCGGC GCCGGTGCGC GCGCTCGGCC ACGGCGCGGA CGCATTGCGC
GAAGCGCGCG CGGCCGCCAC GCGGCTCGAC GCGCTGCTCG CGCTGCCCGG CTTGCCGCAG
CCGCCCGACG GCGCGCAAGC GCCGCCGGCG CCGCGCGACG CATCGATCGC GATCCGCGGC
GTGTGCGTCG ATTTCGACGG CACGCGAATT CTGCACGACA TCGACGCGAC GATCGGGGCC
GGCACGACCA CCGCGATCGT CGGGCCGTCC GGGGCGGGCA AGAGCACGCT GCTCACGCTG
CTCGCGCGTT TCATGGACCC GGATCGCGGC GACGTGCTGC TCGGCGGCGC CGACTTGCGC
GCGCTGCCGC AGCGCGTGCT GCGCGATCAG GTCGCGATGG TGTTTCAGCA GGCGGTGGCG
CTCGACGTGT CGATCGCCGA GAACATCGCG CTGTATCGGC CCGATGCGAG CCGCGACGAG
ATCCGCGCGG CCGCGCGCGC CGCGTGTCTT GCCGATCGCA TCGACGCGCT GCCGGGCGGC
TACGACTGCG TCCACGGGCG CGACGCGCGT TTTTCCGGCG GCGAGCTGCA GCGGCTCGCG
ATCGCGCGCG CGCTGTTGTC GCACGCGCCG CTGCTGCTGC TCGACGAGCC GGCGTCCGCG
CTCGATCCGC AAACCGGGCG CGCGCTGCGC AATGCGCTGC ACGGCGGCGC GCGCACGCGC
GTGATCGTCA GCCACGATCT CGCGGCCGTC CGGCAAGCGG ATCAGATCCT CGTGATGGAT
CGGGGGCGCA TCGTCGAACG CGGCACGCAC CGCGCGCTGC TCGATGCGCG CGGCCTGTAC
GCGAGACTTT GGGCCGAGCG CGATCGCCCG GCCGAGGAGG CGACACGATG A
|
|---|
| Protein sequence | MNAPLSRMLR PFAAPLAAAV ALQALAGVAS LVPWLALGRI AEHWRIAADL DGAAREWLAA
AVAAGVCWLS GQTIALHLTH RVDADLSDRL RKRLADHLQR LPLTWFARTG SDRIARYVDQ
DVRALHQLVA HAPADVTQLI VVPGAALACL LYLNPALLAF ALAPLVLGAA LFRRMRSARF
VPAFADRNAA LEKLMGDYAE FARNPALVRQ YPGAGIEAVV LDSVARFERA FSAWVGRIGG
LGACTQVLLG TPLLLAWVVL GAMGVALARS PIGELCVFAL LIWAVAAPVR ALGHGADALR
EARAAATRLD ALLALPGLPQ PPDGAQAPPA PRDASIAIRG VCVDFDGTRI LHDIDATIGA
GTTTAIVGPS GAGKSTLLTL LARFMDPDRG DVLLGGADLR ALPQRVLRDQ VAMVFQQAVA
LDVSIAENIA LYRPDASRDE IRAAARAACL ADRIDALPGG YDCVHGRDAR FSGGELQRLA
IARALLSHAP LLLLDEPASA LDPQTGRALR NALHGGARTR VIVSHDLAAV RQADQILVMD
RGRIVERGTH RALLDARGLY ARLWAERDRP AEEATR
|
|---|
| |