Gene BTH_II1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1122 
Symbol 
ID3845442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1304761 
End bp1306281 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content72% 
IMG OID637838425 
ProductGGDEF domain-containing protein 
Protein accessionYP_439319 
Protein GI83716605 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.014859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA TACATGCCGG CTTGCGCGGA CGGCGAGGAC CGTCGCACCG GATGCCGCTC 
GGCTACATGG TGATTGCCGG CGCGGTGGCG GTCGCGATCG TCATGATGTC GATCTGCGCG
GCGATCCTGC GCGACAGCCG CGACGACGCG TTCGAGCACG CGCAACGCGC CGCGCGCAAC
ACGCTGCAAA TGATCGAGCG CGACGTCACG CGCAGCTTCG CTCTGTACGG CGGCACGCTC
GCGCGCATCG CCGCGCAGCT CGGCGACCGC CGGATCGCCG CGCTGCCCGC CGATCTGCGC
CGCGAGATCC TGTTCGATTC CGCGGCGGCC GCGAACGAAG CCGGCGCGAT GTACGTGCTG
GACGCGCGCG GGCATGTGAC GCTCGCGTCG ACGCGCGGCC CGCTGCCGAC CGCGAGCTTC
GCGTCATACG ATTTTTTCGC CGCGCAGCGC GACTCGCCGG CGCTCGGCAC ATACCTGAGC
GGGCCGTACC GGATGCCGTC GCGCGGCGGC GAGCCGTGCG TCGCGCTGTC GCGGCGCGTC
GAGCGCGCGG ACGGCGCGTT TGCGGGCGTC GTCGTGCTCG CGGTGCGCGT CGCGTATTTG
CGGCAGTTGC TGGCGGCGGC GAGCGCGGGC CCGCACGGGG TGCTCGCGCT GGTGCACGCG
GACGGACGCA TCGTGGCGCG GATGCCGTTC GACGAGACGC TCGTCGGCCT CGACCTGAGC
GGGACGAGCC TCTACTCGCG CATGCAGTTC GGCCGCTCGG GCGAGTTCTT CGACGTCGAG
CCGATCGATC ACATGAAGCG CTTCTACCTG TATCGGCGGC TCGACGGCGT TCCGCTCGTC
GTGCAGGTCG CGATCGCCGA TGACGACATC TATGCGACGT GGCGCGTGCG CGCGTGGCGC
TTCGGCGTGG TGACGGGCGT GTTCGCGCTG ATCTTCGTCG TGATGAGCGC GTATCTCGCG
CATTCGCTGT GGCGCAAGTC GACGGCCGAG GCGGCGCTCG CGCGGCTCGC CGGCACCGAC
AGCCTCACGG GCCTGCACAA CCGGCGCGCG CTCGACGAGA CGCTCGAGCG CGAATGGCGG
CGCGCGGTGG GCGGCGAGCG GCCGCTCGCG ATCCTGTTCG TCGACATCGA CCACTTCAAG
CGCTACAACG ACACGTACGG CCATCAGGTC GGCGACGAGG TGCTCGCGAC CGTGTCGCGC
TGCATCGCGC AGCAGGCGGC GCGGCTCGGC GACGTCGTCG CCCGCTACGG CGGCGAGGAG
TTCGTCGTCG TGCTGCCGGA CACGCCGCGC GGCGGCGCGC TCGTCGTCGC CGAGCGCGTG
CGCCTCGGCG TGCGGATGCT CGGCATCGAG CACGAGGGCT CGGAGGTCGG GTTCGTGACG
GTCAGCGTCG GCGTCGCGGT GTGGCAGCCG GACGGCGCGC GCGCGCCGCA CATCGCGGCG
ATCGTCGAGG CGGCGGATCA GGCGCTCTAT CAGGCGAAGG CGGCCGGGCG CAATCGCGTC
GTCGACGTCG GGCCCGCTTG A
 
Protein sequence
MKTIHAGLRG RRGPSHRMPL GYMVIAGAVA VAIVMMSICA AILRDSRDDA FEHAQRAARN 
TLQMIERDVT RSFALYGGTL ARIAAQLGDR RIAALPADLR REILFDSAAA ANEAGAMYVL
DARGHVTLAS TRGPLPTASF ASYDFFAAQR DSPALGTYLS GPYRMPSRGG EPCVALSRRV
ERADGAFAGV VVLAVRVAYL RQLLAAASAG PHGVLALVHA DGRIVARMPF DETLVGLDLS
GTSLYSRMQF GRSGEFFDVE PIDHMKRFYL YRRLDGVPLV VQVAIADDDI YATWRVRAWR
FGVVTGVFAL IFVVMSAYLA HSLWRKSTAE AALARLAGTD SLTGLHNRRA LDETLEREWR
RAVGGERPLA ILFVDIDHFK RYNDTYGHQV GDEVLATVSR CIAQQAARLG DVVARYGGEE
FVVVLPDTPR GGALVVAERV RLGVRMLGIE HEGSEVGFVT VSVGVAVWQP DGARAPHIAA
IVEAADQALY QAKAAGRNRV VDVGPA