Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1122 |
Symbol | |
ID | 3845442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 1304761 |
End bp | 1306281 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637838425 |
Product | GGDEF domain-containing protein |
Protein accession | YP_439319 |
Protein GI | 83716605 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.014859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGA TACATGCCGG CTTGCGCGGA CGGCGAGGAC CGTCGCACCG GATGCCGCTC GGCTACATGG TGATTGCCGG CGCGGTGGCG GTCGCGATCG TCATGATGTC GATCTGCGCG GCGATCCTGC GCGACAGCCG CGACGACGCG TTCGAGCACG CGCAACGCGC CGCGCGCAAC ACGCTGCAAA TGATCGAGCG CGACGTCACG CGCAGCTTCG CTCTGTACGG CGGCACGCTC GCGCGCATCG CCGCGCAGCT CGGCGACCGC CGGATCGCCG CGCTGCCCGC CGATCTGCGC CGCGAGATCC TGTTCGATTC CGCGGCGGCC GCGAACGAAG CCGGCGCGAT GTACGTGCTG GACGCGCGCG GGCATGTGAC GCTCGCGTCG ACGCGCGGCC CGCTGCCGAC CGCGAGCTTC GCGTCATACG ATTTTTTCGC CGCGCAGCGC GACTCGCCGG CGCTCGGCAC ATACCTGAGC GGGCCGTACC GGATGCCGTC GCGCGGCGGC GAGCCGTGCG TCGCGCTGTC GCGGCGCGTC GAGCGCGCGG ACGGCGCGTT TGCGGGCGTC GTCGTGCTCG CGGTGCGCGT CGCGTATTTG CGGCAGTTGC TGGCGGCGGC GAGCGCGGGC CCGCACGGGG TGCTCGCGCT GGTGCACGCG GACGGACGCA TCGTGGCGCG GATGCCGTTC GACGAGACGC TCGTCGGCCT CGACCTGAGC GGGACGAGCC TCTACTCGCG CATGCAGTTC GGCCGCTCGG GCGAGTTCTT CGACGTCGAG CCGATCGATC ACATGAAGCG CTTCTACCTG TATCGGCGGC TCGACGGCGT TCCGCTCGTC GTGCAGGTCG CGATCGCCGA TGACGACATC TATGCGACGT GGCGCGTGCG CGCGTGGCGC TTCGGCGTGG TGACGGGCGT GTTCGCGCTG ATCTTCGTCG TGATGAGCGC GTATCTCGCG CATTCGCTGT GGCGCAAGTC GACGGCCGAG GCGGCGCTCG CGCGGCTCGC CGGCACCGAC AGCCTCACGG GCCTGCACAA CCGGCGCGCG CTCGACGAGA CGCTCGAGCG CGAATGGCGG CGCGCGGTGG GCGGCGAGCG GCCGCTCGCG ATCCTGTTCG TCGACATCGA CCACTTCAAG CGCTACAACG ACACGTACGG CCATCAGGTC GGCGACGAGG TGCTCGCGAC CGTGTCGCGC TGCATCGCGC AGCAGGCGGC GCGGCTCGGC GACGTCGTCG CCCGCTACGG CGGCGAGGAG TTCGTCGTCG TGCTGCCGGA CACGCCGCGC GGCGGCGCGC TCGTCGTCGC CGAGCGCGTG CGCCTCGGCG TGCGGATGCT CGGCATCGAG CACGAGGGCT CGGAGGTCGG GTTCGTGACG GTCAGCGTCG GCGTCGCGGT GTGGCAGCCG GACGGCGCGC GCGCGCCGCA CATCGCGGCG ATCGTCGAGG CGGCGGATCA GGCGCTCTAT CAGGCGAAGG CGGCCGGGCG CAATCGCGTC GTCGACGTCG GGCCCGCTTG A
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Protein sequence | MKTIHAGLRG RRGPSHRMPL GYMVIAGAVA VAIVMMSICA AILRDSRDDA FEHAQRAARN TLQMIERDVT RSFALYGGTL ARIAAQLGDR RIAALPADLR REILFDSAAA ANEAGAMYVL DARGHVTLAS TRGPLPTASF ASYDFFAAQR DSPALGTYLS GPYRMPSRGG EPCVALSRRV ERADGAFAGV VVLAVRVAYL RQLLAAASAG PHGVLALVHA DGRIVARMPF DETLVGLDLS GTSLYSRMQF GRSGEFFDVE PIDHMKRFYL YRRLDGVPLV VQVAIADDDI YATWRVRAWR FGVVTGVFAL IFVVMSAYLA HSLWRKSTAE AALARLAGTD SLTGLHNRRA LDETLEREWR RAVGGERPLA ILFVDIDHFK RYNDTYGHQV GDEVLATVSR CIAQQAARLG DVVARYGGEE FVVVLPDTPR GGALVVAERV RLGVRMLGIE HEGSEVGFVT VSVGVAVWQP DGARAPHIAA IVEAADQALY QAKAAGRNRV VDVGPA
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