| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0938 |
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| Symbol | |
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| ID | 3845318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1102705 |
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| End bp | 1106733 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637838241 |
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| Product | glycogen operon protein GlgX |
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| Protein accession | YP_439135 |
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| Protein GI | 83716754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases
[COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCACG CCCTTGCACT CGACGCGGGC GCGCCCGCGC CGCTCGGCTC GCGGTGGGAC
GGCGGCGGCG TCAATTTCGC GGTCTACTCG CGGCATGCGG CGCGCGTCGA GCTCTGCCTG
TTCGACGCAT CCGGCCGGCA AGAGCGCGCG CGCCTGACGC TGCCCGCGCG CACGGGCGAC
GTATGGCACG GCTATTTGCC GGGCGCCGCG CCCGGAACCG TCTATGGATA CCGCGTGCAC
GGCTGCTACG CGCCGCATCG CGGCGAACGC TTCAATCCGC ACAAGCTGCT GCTCGACCCG
TGCGCGTGCG CGCTGACGGG CGATTTCGTC TGGCACGACG CAGTGTACGG ATACCGGCGC
GATCGCGGCG CGGACGACCC GCACGCGCGC GATCCGCGCG ACAGCGCGCC GTATGTCCCG
AAGTCGCGGG TCGTCGCGCC CGCGGTGCGC GGCGCGCGCC CGCCGAAGCC GGGCACGCCG
TGGCGCGACA CGGTCATCTA CGAGCTCCAC GTACGCGGCT TCACGCGGCG GCACCCGGAC
GTCCCCGCGC CGCTGCGCGG CACGGTCGCG GGGCTCGGCA CGCGCGCCGC GATCGCCCAT
TTGCGCGAGC TCGGCGTGAG CGCGATCGAG TTGCTGCCGA CGGCCGCGTT CATCGACGAG
GCCGAACTGG CCCGGCGCGG CCGACGCAAT TACTGGGGCT ACAATCCGCT CGCGCCGTGC
GCGCCGCATC CCCGCTATCT CGCGCACGAT GGCGACGACG AGTTCGCCTG CACCGTCGAC
CGGCTTCACG AGGCCGGCAT CGAAGTGATC GTCGACGTCG TGCTGAACCA CACCGCGGAA
CGCGATGCGC GGGGGCCCAC CCTCTGCTTG CGCGGGCTCG ACAACGCGAG CTATTACCGG
CTGGACCCCG AGCGCCCGGC CCGCTATGTC GACTACACCG GCTGCGGAAA CACGCTCGAT
CTGTCGCGGC CGGCCGCGAT CGCGCTCGCG CTCGCGACGC TGCGCCATTG GGCGTGCGAC
ATCGGCGTCG ACGGCTTTCG CTTCGATCTC GCGACGACGA TGCTGCGCGA CGCCGACGGC
CGCGTCGGCA ACGAGGCGCC GCTCGTCGCC GCGATCCTCG CCGACGCCGA ACTGGCGTCG
CTGAAGCTGA TCGCGGAGCC GTGGGACGCG ACGCTTTCCG GCTATCGGCT GGGCGGATTT
GCGCCGCCGT TCGCCGAGTG GAACGATCGC TATCGCGACG GCATGCGCCG CTTCTGGCGC
GGCGATCGCG GCGCGGCGGG CGAATGCGCG ACGCGCTTCG CGGGATCGAG CGACGTGTTC
GCGCGCGCCG GCCGCGCGCC ATCGGCCAGC GTGAACTTCG TCACCGCGCA CGACGGCTTC
ACGCTCGCCG ACCTGACGTC GTATGCCGCG CCGCGCGGCG GCGGCCCGGG GGCGTCGTCC
GGCCGACGTG ACGAAATCAC CGTGTGCGGC GCCGACGAGA GCGCGGCGGA CGACGCGAGC
GTGCGGCTGC GACGCCGGCG GCTGCGCGCA TCGATGCTCG GCGCGCTGGC GATGTCGCAC
GGCACGCCGA TGATCGTCGC GGGCGACGAG TTCTCGCGCA CGCTGCACGG CGACAACAAC
GCGTACTGCG TGGATTCGCC CGCGAGCTGG ATCGACTGGT CCGCGCGCGG CGATCCCGAT
CGGGACCTGC GCACCTTCGT GACGCGCGCA TTGAGCGTGC GACGCGCGCT CGACATGCTG
CGGCAGACGC GCTTCTTCGA TGGTCGCCCG ATCGCCGCGC AAGGTGCGGA CAAGGATATC
GCGTGGCTGC TCCCGGAAGG CCGCGAGCTG ACCGAGGACG ACTGGCGCGC GAACGAGACA
CGCGGCTTCG CCGCGCTGCT CGCCGATCCT CGTCGCGGCG GCGACGCCTC GCCCTCGCGC
ATCTATGTCG CGATGAACGC GCGAGACACG CGATGCGCCT TTCGTCTGCC GGAAAGCGCC
GGCGAGCGGA CGCCCGACTG GCTCGTCGCG CTCGACAGCG ACGCGACCGA ATGCGCAGCC
GCCGGCGCGC TGTATCCGGG CGGAAGCTGG ATCACGGTCG AGGGCGGCGG CTTCGTCGCG
CTCGTGCCGG CCGACACGGC GGGCGTCGGC GTCGCCGGCC CGCTCGCCGC GCGCGCGCGG
CGCGCCGGCA TCGCAATCGA CTACGTCGGC GCGGACGGCC TGCGCCGGCA GGTGCCGGCG
GAAGCGCTCG AGCGGCTTGT CGCCGCGCTC GGCGAACGCG CCGACGCGGC CGAGGGCCCA
GACGGCACGA CACGCGCCGG CGCCGACGCG GCACGGCCGT CGAGCGCGCG ACGCCCGGCG
ACGCAAGCGC CCGCGCGCTG CTGGCTGCCG CTCGCGCTGC GGCAGCGTCC CGGATGCTGG
GCGCTGTCGG TCCAGACGTA TGGGCTGCGC TCGGCGCGAA GCTGGGGCAT CGGCGACTTC
GACGATCTCG CGCACATGAT CGACGTCGCG GCGCGCCTGG GCGCCGCAGG GGTGCAATCG
AGCCCCGTGC ACGCGCTTTC GCTGTCGCAG CCGCAACGCG CATCGCCCTA TGCGCCGTGC
GATCGCCTGA TGCTCAATCC GCTGCTGATA TCGGCGCCGC TCGCGGCGGG CGATGCGCCG
CCGCCCGACT ATCTGCGCTT TGTCGAGCAA CCGCGCGTGC GCGCCGAGTT GTCGCGCATC
GAACGCGCGG CGACGATCGA TTACCCGGCC GTCGCCTCGC TCAAGCGGCA GGCGCTCGCG
CTGCTGCACG CGGCGTTCGT CCGCGACGGC CCGGATGCGG AACGCACGGC CTATCGCGCG
TTTTGTCACG GCGAAGGCGT CGCGCTGCGC GAATACGCGA CGTTCGAGGC GCTGGGCGAA
TGGCAAGCCG CGCAGCAGGG TCGATATGTC GGCTGGATGC AATGGCCATC GGCCTATCGC
GATCCGCGCT CGACACCCGT CGCCGATTTC GCCGACGCGC ATCGCGAGCG CATCGATTTT
TTCATGTACC TGCAGTGGCA AGCGAGGCGT CAATGGCATC GCGCGGCCGC GCGCGGCCGT
GATGCGCGGA TGGCGCTCGG GCTCGTCGCC GACCTCGCGC TCGGAGCCGG CGCGGACAGC
GTCGAAGCGT GGCGCTGGCC GGGGCTCGCT GCGCTCGATG CGGAACTGGG CGCGCCGCCC
GATGCGTTCG CCGCGCGCGG ACAGCGCTGG GGGCTCGCGC CCTGGCGTGT GCAACGGCTG
GCCGACGCCG ATTTCGCGCC GTTCGCCGCG GTGCTCGACG CGGCCATGCG CGACGCCGGC
GCGCTGCGGA TCGATCATGC GGCCGGGTTG ATGCGCCAGT TCTGGGTCCC GCGCGGCGGC
GACGCGGCGC GCGGCGCATA CGTCTCGTAT CCGTTCGACG CGTTGCTCGC CCGCATCACG
CGCGCGAGCG CCGCGCATCG CTGCGCCGTG ATCGGCGAAG ATCTCGGCAA CGTGCCGCCC
GGCCTGCGCG AACGTCTCGC GCAAGCGCAC ATCCTCGGTT GCCGGGTTGT CTATTTCGAA
AGGACGCCGG ACCATGCGTT CGTCGCCGGC GATCGCTATC CGCCGCTGAC GGCCGCGATG
GCATCGACGC ACGATTTGCC GACGATCGCG GGCTTCTACT CGGGCGCCGA CAACGACGAG
CTCGACGCGC GCGGATTACG CGCATCGCCG TCGCTCGCCG CGCTTGCGCG CGAAGAGCGA
CGAGTCGCCC TGGCGACGCT GCGCGCACGG CTCGCGCCGT ATGGCGACAC GACGAACGCG
GCGGCGTTCG CGCGCGCATT GCATCGCTTT CTCGCCGACT GCGCGAGCAG GCTCGTCATC
GTGCAGCTCG ACGATGCGCT CGGCGTCGAA CGTCAGGCCA ATCTGCCGCC CCTCGGCGAT
GCGCCGCCGA ACTGGCGGCA ACGCATTCCC GTCGCGATCG ACGCGCTTGC AAATCATGGG
GGCCTGCGCG ATCTCGCATG GATATTCGAG AAACGCGCGC CGTCGAACGG ATCGAGCCGC
ACCGAATAG
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| Protein sequence | MPHALALDAG APAPLGSRWD GGGVNFAVYS RHAARVELCL FDASGRQERA RLTLPARTGD
VWHGYLPGAA PGTVYGYRVH GCYAPHRGER FNPHKLLLDP CACALTGDFV WHDAVYGYRR
DRGADDPHAR DPRDSAPYVP KSRVVAPAVR GARPPKPGTP WRDTVIYELH VRGFTRRHPD
VPAPLRGTVA GLGTRAAIAH LRELGVSAIE LLPTAAFIDE AELARRGRRN YWGYNPLAPC
APHPRYLAHD GDDEFACTVD RLHEAGIEVI VDVVLNHTAE RDARGPTLCL RGLDNASYYR
LDPERPARYV DYTGCGNTLD LSRPAAIALA LATLRHWACD IGVDGFRFDL ATTMLRDADG
RVGNEAPLVA AILADAELAS LKLIAEPWDA TLSGYRLGGF APPFAEWNDR YRDGMRRFWR
GDRGAAGECA TRFAGSSDVF ARAGRAPSAS VNFVTAHDGF TLADLTSYAA PRGGGPGASS
GRRDEITVCG ADESAADDAS VRLRRRRLRA SMLGALAMSH GTPMIVAGDE FSRTLHGDNN
AYCVDSPASW IDWSARGDPD RDLRTFVTRA LSVRRALDML RQTRFFDGRP IAAQGADKDI
AWLLPEGREL TEDDWRANET RGFAALLADP RRGGDASPSR IYVAMNARDT RCAFRLPESA
GERTPDWLVA LDSDATECAA AGALYPGGSW ITVEGGGFVA LVPADTAGVG VAGPLAARAR
RAGIAIDYVG ADGLRRQVPA EALERLVAAL GERADAAEGP DGTTRAGADA ARPSSARRPA
TQAPARCWLP LALRQRPGCW ALSVQTYGLR SARSWGIGDF DDLAHMIDVA ARLGAAGVQS
SPVHALSLSQ PQRASPYAPC DRLMLNPLLI SAPLAAGDAP PPDYLRFVEQ PRVRAELSRI
ERAATIDYPA VASLKRQALA LLHAAFVRDG PDAERTAYRA FCHGEGVALR EYATFEALGE
WQAAQQGRYV GWMQWPSAYR DPRSTPVADF ADAHRERIDF FMYLQWQARR QWHRAAARGR
DARMALGLVA DLALGAGADS VEAWRWPGLA ALDAELGAPP DAFAARGQRW GLAPWRVQRL
ADADFAPFAA VLDAAMRDAG ALRIDHAAGL MRQFWVPRGG DAARGAYVSY PFDALLARIT
RASAAHRCAV IGEDLGNVPP GLRERLAQAH ILGCRVVYFE RTPDHAFVAG DRYPPLTAAM
ASTHDLPTIA GFYSGADNDE LDARGLRASP SLAALAREER RVALATLRAR LAPYGDTTNA
AAFARALHRF LADCASRLVI VQLDDALGVE RQANLPPLGD APPNWRQRIP VAIDALANHG
GLRDLAWIFE KRAPSNGSSR TE
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